RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PLA2G7Q13093 441 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 PWWP2BQ6NUJ5 590 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 OR6V1Q8N148 313 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 OR10G6Q8NH81 332 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 CCL4L1Q8NHW4 92 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 S100A16Q96FQ6 103 aaKnown RBP25.2■■□□□ 1.62
CBX4-201ENST00000269397 SRMSQ9H3Y6 488 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 ZNF275Q9NSD4 429 aaPredicted RBP25.2■■□□□ 1.62
CBX4-201ENST00000269397 THAP10Q9P2Z0 257 aaPredicted RBP25.2■■□□□ 1.62
CBX4-201ENST00000269397 KIF25Q9UIL4 384 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 V9GY05 133 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 OR6C68A6NDL8 312 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 MCRIP1C9JLW8 97 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 CCL5P13501 91 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 IFNGR1P15260 489 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 IGFALSP35858 605 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 CAPZA2P47755 286 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 C2orf27AQ580R0 203 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 POMGNT2Q8NAT1 580 aa25.2■■□□□ 1.62
CBX4-201ENST00000269397 ANKRD20A5PA0PJZ0 165 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 PRR19A6NJB7 356 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 ACAA2P42765 397 aaKnown RBP25.19■■□□□ 1.62
CBX4-201ENST00000269397 FAM53BQ14153 422 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 ELFN2Q5R3F8 820 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 OR14A16Q8NHC5 309 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 SPPL3Q8TCT6 385 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 LCORQ96JN0 433 aaPredicted RBP25.19■■□□□ 1.62
CBX4-201ENST00000269397 SLC6A17Q9H1V8 727 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 A0A1W2PQU0 124 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 NDUFB2O95178 105 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 SRSF5Q13243 272 aaKnown RBP25.19■■□□□ 1.62
CBX4-201ENST00000269397 C2orf68Q2NKX9 166 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 DGAT2L6Q6ZPD8 337 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 OR6M1Q8NGM8 313 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 OR5M1Q8NGP8 315 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 COLEC10Q9Y6Z7 277 aa25.19■■□□□ 1.62
CBX4-201ENST00000269397 MFSD2BA6NFX1 497 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 ADH7P40394 386 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 EPHA4P54764 986 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 OR14C36Q8NHC7 312 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 GINS4Q9BRT9 223 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 TAS2R5Q9NYW4 299 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 ZNF281Q9Y2X9 895 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 TCRBV16S1A1N1A0A5B0 115 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 NAP1L6A6NFF2 107 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 PYCARD-AS1I3L0S3 204 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 ZNF749O43361 778 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 SUSD5O60279 629 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 NMBP08949 121 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 GIPP09681 153 aaPredicted RBP25.18■■□□□ 1.62
CBX4-201ENST00000269397 NUP62P37198 522 aaPredicted RBP25.18■■□□□ 1.62
CBX4-201ENST00000269397 DIO1P49895 249 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 ERVK-25P63136 954 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 PDGFRLQ15198 375 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 PRICKLE4Q2TBC4 344 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 KIRREL2Q6UWL6 708 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 SPICQ8N5J4 248 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 NT5CQ8TCD5 201 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 TSSK2Q96PF2 358 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 KIR3DX1Q9H7L2 352 aa25.18■■□□□ 1.62
CBX4-201ENST00000269397 GRXCR1A8MXD5 290 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 LPLP06858 475 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 HNRNPA1P09651 372 aaKnown RBP eCLIP25.17■■□□□ 1.62
CBX4-201ENST00000269397 SPI1P17947 270 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 CBFBQ13951 182 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 NUDT18Q6ZVK8 323 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 ZNF511Q8NB15 262 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 ZNF426Q9BUY5 554 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 MFRPQ9BY79 579 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 C14orf105Q9NVL8 296 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 TICRRQ7Z2Z1 1910 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 SMIM10L1P0DMW3 83 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 PVRP15151 417 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 ZP3P21754 424 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 MELKQ14680 651 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 HLXQ14774 488 aaPredicted RBP25.17■■□□□ 1.62
CBX4-201ENST00000269397 ZNF626Q68DY1 528 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 NPEPL1Q8NDH3 523 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 LHFPL5Q8TAF8 219 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 SMIM10Q96HG1 83 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 DNAJB12Q9NXW2 375 aaKnown RBP25.17■■□□□ 1.62
CBX4-201ENST00000269397 KLF15Q9UIH9 416 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 ENTPD2Q9Y5L3 495 aa25.17■■□□□ 1.62
CBX4-201ENST00000269397 A0A1B0GTH9 108 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 OR2M5A3KFT3 312 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 CHURC1-FNTBB4DL54 471 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 PDCD5O14737 125 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 GALR3O60755 368 aaPredicted RBP25.16■■□□□ 1.62
CBX4-201ENST00000269397 RGS7BPQ6MZT1 257 aaPredicted RBP25.16■■□□□ 1.62
CBX4-201ENST00000269397 OR52R1Q8NGF1 315 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 STACQ99469 402 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 FXYD6-FXYD2A0A087WZ82 144 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 KAT7O95251 611 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 OR8G3PP0DMU2 310 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 VSIG10L2P0DP72 767 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 RAP2BP61225 183 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 EXOSC6Q5RKV6 272 aaKnown RBP25.16■■□□□ 1.62
CBX4-201ENST00000269397 ST8SIA4Q92187 359 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 SIPA1Q96FS4 1042 aa25.16■■□□□ 1.62
CBX4-201ENST00000269397 APOOQ9BUR5 198 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms