RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 UNQ6126/PRO20091Q6UXV3 157 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TMPRSS7Q7RTY8 843 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TGIF2LXQ8IUE1 241 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SLC35F2Q8IXU6 374 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR6N1Q8NGY5 312 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PHOSPHO1Q8TCT1 267 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ARID2Q68CP9 1835 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TAZQ16635 292 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 THEM4Q5T1C6 240 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR4C11Q6IEV9 310 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TMEM150AQ86TG1 271 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 CBARPQ8N350 705 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 DAZLQ92904 295 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 SLC12A9Q9BXP2 914 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 GPR160Q9UJ42 338 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ELF5Q9UKW6 265 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 INSL6Q9Y581 213 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ZNF729A6NN14 1252 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 FAM72CH0Y354 149 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PPM1DO15297 605 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 RGS11O94810 467 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SOD2P04179 222 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ATXN1LP0C7T5 689 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 RAB28P51157 221 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FAM72AQ5TYM5 149 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 XAF1Q6GPH4 301 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FAM72DQ6L9T8 149 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PLBD1Q6P4A8 553 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 APOOLQ6UXV4 268 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FAM72BQ86X60 149 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PARD6AQ9NPB6 346 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TREX1Q9NSU2 369 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 AKAIN1P0CW23 69 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TAGLN2P37802 199 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 IRF4Q15306 451 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 Q6ZVL8 140 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR4K5Q8NGD3 323 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 UHRF1Q96T88 793 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 INPP5KQ9BT40 448 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 C11orf84Q9BUA3 381 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 MED12LQ86YW9 2145 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 B4E171 279 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 LEFTY1O75610 366 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR8U9P0C7N5 309 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 POLR2IP36954 125 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 PIGAP37287 484 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PTGFRP43088 359 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 RPL29P47914 159 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 SLC17A1Q14916 467 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 AWAT2Q6E213 333 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 DBX2Q6ZNG2 339 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 USP53Q70EK8 1073 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 NDUFAF7Q7L592 441 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 C7orf61Q8IZ16 206 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FRZBQ92765 325 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 PDE7BQ9NP56 450 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 EXO1Q9UQ84 846 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 GBF1Q92538 1859 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PTHP01270 115 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SYPP08247 313 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 RBMS2Q15434 407 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 SGCBQ16585 318 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 GGNBP1Q5YKI7 109 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 KCNIP4Q6PIL6 250 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR52E2Q8NGJ4 325 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR6N2Q8NGY6 317 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 DDX60LQ5H9U9 1706 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 KLK3P07288 261 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 RAB40ALP0C0E4 278 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 Q5PR19 223 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 B3GNTL1Q67FW5 361 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 RNF111Q6ZNA4 994 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 GKN2Q86XP6 184 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ZSCAN4Q8NAM6 433 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 GPR148Q8TDV2 347 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FBRSQ9HAH7 460 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 KLHL13Q9P2N7 655 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PSORS1C1Q9UIG5 152 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 MALRD1Q5VYJ5 2156 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 HCRTR2O43614 444 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 UBL3O95164 117 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 PNMTP11086 282 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RNH1P13489 461 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 SERTAD2Q14140 314 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GBX1Q14549 363 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RGNQ15493 299 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 EOGTQ5NDL2 527 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 TMEM107Q6UX40 140 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GLRX5Q86SX6 157 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CBLN2Q8IUK8 224 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 PRSS58Q8IYP2 241 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ZFP41Q8N8Y5 198 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CDRT4Q8N9R6 151 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 MAL2Q969L2 176 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 TMEM19Q96HH6 336 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms