RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 DIO1P49895 249 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 ERVK-25P63136 954 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 SORDQ00796 357 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 SSBP1Q04837 148 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR2F1Q13607 317 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 MTSS1LQ765P7 747 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 DND1Q8IYX4 353 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR52E2Q8NGJ4 325 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 NARS2Q96I59 477 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 C10orf90Q96M02 699 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 FERD3LQ96RJ6 166 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF350Q9GZX5 532 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 CASP8AP2Q9UKL3 1982 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR14I1A6ND48 311 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 PRSS44E7EML9 344 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 PMS2P2O95744 297 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 IGF2P01344 180 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 CERS1P27544 350 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 PSMD4P55036 377 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OC90Q02509 493 aaPredicted RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 PRKCZQ05513 592 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 LTB4RQ15722 352 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 ADAMTSL4Q6UY14 1074 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 LINC01555Q8NAE3 123 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR2A1Q8NGT9 310 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 RBM18Q96H35 190 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 LGR4Q9BXB1 951 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 APMAPQ9HDC9 416 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 MBD2Q9UBB5 411 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 ACOD1A6NK06 481 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 DISC1C4P0D8 188 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 F8W036 122 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 PAK4O96013 591 aaPredicted RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 GP1BAP07359 652 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 GKN3PP0CG01 181 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 RAB28P51157 221 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 HCCSP53701 268 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 CAP1Q01518 475 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF345Q14585 488 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 LY6G5CQ5SRR4 150 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 HAGHLQ6PII5 290 aaPredicted RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC39A11Q8N1S5 342 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 KCNRGQ8N5I3 272 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 RFLNBQ8N5W9 214 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 OR7G2Q8NG99 324 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 OR4C16Q8NGL9 310 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 COX14Q96I36 57 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 TNFRSF13CQ96RJ3 184 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 TTTY10Q9BZA0 68 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 EXO5Q9H790 373 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC23A2Q9UGH3 650 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 CDV3Q9UKY7 258 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 THSD7BQ9C0I4 1608 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 SPINT1O43278 529 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 EIF4E2O60573 245 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 RNGTTO60942 597 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF432O94892 652 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 AK1P00568 194 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 ITPKBP27987 946 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 NAA10P41227 235 aaPredicted RBP11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 PRMT2P55345 433 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 CLDN12P56749 244 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 CSRP2Q16527 193 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 DUSP5Q16690 384 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 C2orf68Q2NKX9 166 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 TMEM52BQ4KMG9 183 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 LPCAT3Q6P1A2 487 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF227Q86WZ6 799 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 TMEM185AQ8NFB2 350 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 WFIKKN2Q8TEU8 576 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 MYADMQ96S97 322 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
CHMP2B-201ENST00000263780 A0A1W2PS29 197 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 OBSL1O75147 1896 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 NDUFB2O95178 105 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 MELTFP08582 738 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 DDX6P26196 483 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 MST1P26927 711 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 PSMB10P40306 273 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 RAB13P51153 203 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 CLDN2P57739 230 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 LTBQ06643 244 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 Q499Y3 187 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 DCAF12L2Q5VW00 463 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 ELP2Q6IA86 826 aa11.36□□□□□ -0.59
CHMP2B-201ENST00000263780 FAM111BQ6SJ93 734 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms