RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 NDEL1Q9GZM8 345 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 MRPS18AQ9NVS2 196 aaKnown RBP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 MRPL39Q9NYK5 338 aaKnown RBP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 TAS2R5Q9NYW4 299 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 PLA2G3Q9NZ20 509 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 SEC14L4Q9UDX3 406 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 DKKL1Q9UK85 242 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 POLHQ9Y253 713 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 SMIM31A0A1B0GVY4 71 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 FAM183AA6NL82 134 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 SNTNA6NMZ2 147 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 IFNGP01579 166 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF3P17036 446 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 GPR85P60893 370 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 ERVK-25P63136 954 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 MFSD13AQ14CX5 517 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 PLBD1Q6P4A8 553 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 FAM122BQ7Z309 247 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 ATP6V1C2Q8NEY4 427 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 BBS1Q8NFJ9 593 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 SLC25A43Q8WUT9 341 aaPredicted RBP20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 RFKQ969G6 155 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 UBL7Q96S82 380 aaPredicted RBP20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 FAM192AQ9GZU8 254 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 KLHL21Q9UJP4 597 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 WASF3Q9UPY6 502 aa20.64■□□□□ 0.89
SMARCB1-201ENST00000263121 A6NL46 340 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 H3BML4 177 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 SLC34A2O95436 690 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 ADRA2AP08913 450 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 IMPDH2P12268 514 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 HIST1H1CP16403 213 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF17P17021 662 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 FKBP2P26885 142 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 SRD5A2P31213 254 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 IDUAP35475 653 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 MAP2K4P45985 399 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 CDH11P55287 796 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 FOXO1Q12778 655 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 ITGADQ13349 1161 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 MFAP5Q13361 173 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 CRMP1Q14194 572 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 GLYR1Q49A26 553 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 GTF2IRD2BQ6EKJ0 949 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 GTF2IRD2Q86UP8 949 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 FAR1Q8WVX9 515 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 MUL1Q969V5 352 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 TUBA1CQ9BQE3 449 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 ASPNQ9BXN1 380 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 RNF32Q9H0A6 362 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 NDUFA13Q9P0J0 144 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 CORINQ9Y5Q5 1042 aa20.63■□□□□ 0.89
SMARCB1-201ENST00000263121 PINLYPA6NC86 204 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 LIPT2A6NK58 231 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 M0R082 166 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 IMPA2O14732 288 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 FADS2O95864 444 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 TXNDC12O95881 172 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 TFPIP10646 304 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 HTR1FP30939 366 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 CLK1P49759 484 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 GTF2A1P52655 376 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 CTXN1P60606 82 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 IRF3Q14653 427 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 RAB39AQ14964 217 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 NIPAL3Q6P499 406 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 GID4Q8IVV7 300 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 SLC37A3Q8NCC5 494 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 MDS2Q8NDY4 140 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF417Q8TAU3 575 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 PTP4A1Q93096 173 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 RELTQ969Z4 430 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF587Q96SQ5 575 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 FAM173AQ9BQD7 235 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 HCAR1Q9BXC0 346 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 CDCA4Q9BXL8 241 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 RBM38Q9H0Z9 239 aaKnown RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF552Q9H707 407 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 MED20Q9H944 212 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 ZFP64Q9NPA5 681 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 ACOT13Q9NPJ3 140 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 KLHL1Q9NR64 748 aa20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 RPH3AQ9Y2J0 694 aaPredicted RBP20.62■□□□□ 0.89
SMARCB1-201ENST00000263121 OR5H15A6NDH6 313 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 PRR23D1E9PI22 279 aaPredicted RBP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 PLPP3O14495 311 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 F13BP05160 661 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 PRR23D2P0DMB1 279 aaPredicted RBP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 SPINK2P20155 84 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 MYBPHQ13203 477 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 OR7A5Q15622 319 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 TBCEQ15813 527 aaPredicted RBP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 SCAIQ8N9R8 606 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 OR2M7Q8NG81 312 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 OR52E2Q8NGJ4 325 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 OR4K13Q8NH42 304 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 RNFT2Q96EX2 444 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 BOKQ9UMX3 212 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms