RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 OR9K2Q8NGE7 335 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 HRASLS5Q96KN8 279 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 RHNO1Q9BSD3 238 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 NIT2Q9NQR4 276 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 NTNG1Q9Y2I2 539 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 A0A0D9SG52 128 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TUSC2O75896 110 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 CBX7O95931 251 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 CPMP14384 443 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TRIM23P36406 574 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 OR1D4P47884 311 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ERVK-16P61578 105 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 SIRPAP78324 504 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 DUSP7Q16829 419 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 RFPL4BQ6ZWI9 263 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZNF511Q8NB15 262 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 AVL9Q8NBF6 648 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZBTB44Q8NCP5 570 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 RASD2Q96D21 266 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 SPIN2AQ99865 258 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 PDCD1LG2Q9BQ51 273 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZNF768Q9H5H4 540 aaKnown RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 SDHAF2Q9NX18 166 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZNF780AO75290 641 aaPredicted RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 CALCBP10092 127 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 IRF2P14316 349 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 C5AR1P21730 350 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 ZNF33BQ06732 778 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 RPL22L1Q6P5R6 122 aaKnown RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 SECTM1Q8WVN6 248 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CMSS1Q9BQ75 279 aaKnown RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 HOXD1Q9GZZ0 328 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 PCYT1BQ9Y5K3 369 aaPredicted RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 DRGXA6NNA5 263 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 VSTM5A8MXK1 200 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 GLI4P10075 376 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CEBPBP17676 345 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 ELK1P19419 428 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 S100A11P31949 105 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 MRPS10P82664 201 aaKnown RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 CAMK2DQ13557 499 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 MARCH8Q5T0T0 291 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 GDPD3Q7L5L3 318 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 OR51D1Q8NGF3 324 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 OR5L2Q8NGL0 311 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 TBC1D20Q96BZ9 403 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CCNL2Q96S94 520 aaPredicted RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 ALG12Q9BV10 488 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 EMC9Q9Y3B6 208 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 SLC2A10O95528 541 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 KCNJ10P78508 379 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 ZMAT1Q5H9K5 638 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 OGFOD3Q6PK18 319 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 SYT9Q86SS6 491 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 PTDSS2Q9BVG9 487 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CHST11Q9NPF2 352 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 KLHL13Q9P2N7 655 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CGGBP1Q9UFW8 167 aaPredicted RBP11.2□□□□□ -0.62
SMG6-201ENST00000263073 A0A0A6YYJ9 748 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 SLC43A1O75387 559 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 HTR2CP28335 458 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 SLC19A1P41440 591 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 ZNF439Q8NDP4 499 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 TXNDC15Q96J42 360 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 ACAD8Q9UKU7 415 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 CHST2Q9Y4C5 530 aa11.2□□□□□ -0.62
SMG6-201ENST00000263073 TEX51A0A1B0GUA7 166 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 HMX2A2RU54 273 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TRABD2BA6NFA1 517 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 KRBOX1C9JBD0 128 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SEMA4FO95754 770 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 EMP3P54852 163 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 PDE7AQ13946 482 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RELL2Q8NC24 303 aaPredicted RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 OR51S1Q8NGJ8 323 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLCO4A1Q96BD0 722 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 RNF170Q96K19 258 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TCEAL7Q9BRU2 100 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SELENOIQ9C0D9 397 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SEMA4GQ9NTN9 838 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 ADAM12O43184 909 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 OPRD1P41143 372 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 EEF1A2Q05639 463 aaKnown RBP11.19□□□□□ -0.62
SMG6-201ENST00000263073 GPR176Q14439 515 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 ADAM5Q6NVV9 412 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 SLC22A25Q6T423 547 aa11.19□□□□□ -0.62
SMG6-201ENST00000263073 TPRA1Q86W33 373 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms