RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TMEM200AQ86VY9 491 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 EXOSC3Q9NQT5 275 aaKnown RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 COLCA2A8K830 154 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 FAAHO00519 579 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ARPC1BO15143 372 aaKnown RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 NDUFS4O43181 175 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 FCMRO60667 390 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 KLHL18O94889 574 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 RHOP08100 348 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 CERS1P27544 350 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 SLC25A28Q96A46 364 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 NUS1Q96E22 293 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 TMEM185BQ9H7F4 350 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 RASL12Q9NYN1 266 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 SLC5A10A0PJK1 596 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SLC16A5O15375 505 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 PMP2P02689 132 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SRPRAP08240 638 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 UBBP0CG47 229 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 PIPP12273 146 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 CPEP16870 476 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SDHAP31040 664 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 PKIAP61925 76 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 RPS27AP62979 156 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 UBA52P62987 128 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 DCDP81605 110 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 DHODHQ02127 395 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 HENMT1Q5T8I9 393 aaKnown RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 FAM111BQ6SJ93 734 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 PRR18Q8N4B5 295 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 CCDC54Q8NEL0 328 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SAMD8Q96LT4 415 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ZNF354BQ96LW1 612 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 RNF208Q9H0X6 261 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SPHK2Q9NRA0 654 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 THSD1Q9NS62 852 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 EYSQ5T1H1 3165 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 A0A087WUU8 490 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 UBE2QL1A1L167 161 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SOX15O60248 233 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 FGBP02675 491 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 CPT2P23786 658 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 SHC1P29353 583 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 MC3RP41968 323 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 NHLH2Q02577 135 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ODF4Q2M2E3 257 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ZNF805Q5CZA5 627 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 UNQ6494/PRO21346Q6UXR6 183 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ETV3LQ6ZN32 361 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 AMZ2Q86W34 360 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 LGR4Q9BXB1 951 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 C6orf106Q9H6K1 298 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-201ENST00000263071 ADAP2Q9NPF8 381 aa13.08□□□□□ -0.32
SCARF1-201ENST00000263071 PRAMEF27A3QJZ7 478 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 OR2T1O43869 369 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 TFPIP10646 304 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 ABOP16442 354 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 BDKRB2P30411 391 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 GRPRP30550 384 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 NTSP30990 170 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 AKR1C3P42330 323 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 SURF2Q15527 256 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-201ENST00000263071 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-201ENST00000263071 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 MAFIPQ8WZ33 124 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 WDR89Q96FK6 387 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-201ENST00000263071 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 ABHD1Q96SE0 405 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 NAA11Q9BSU3 229 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-201ENST00000263071 GLIPR2Q9H4G4 154 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 ISYNA1Q9NPH2 558 aa13.07□□□□□ -0.32
SCARF1-201ENST00000263071 GAR1Q9NY12 217 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms