RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 POLR2J2Q9GZM3 115 aaKnown RBP24.83■■□□□ 1.57
SMARCD3-201ENST00000262188 POLR2J3Q9H1A7 115 aaKnown RBP24.83■■□□□ 1.57
SMARCD3-201ENST00000262188 C20orf141Q9NUB4 165 aa24.83■■□□□ 1.57
SMARCD3-201ENST00000262188 TMED7Q9Y3B3 224 aa24.83■■□□□ 1.57
SMARCD3-201ENST00000262188 MPDZO75970 2070 aa24.83■■□□□ 1.57
SMARCD3-201ENST00000262188 A0A087WUJ7 227 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 SRD5A2P31213 254 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 POLR2HP52434 150 aaKnown RBP24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 C1QL3Q5VWW1 255 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 LINC00114Q6XXX2 140 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 NRMQ8IXM6 262 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 OR4K5Q8NGD3 323 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM25AB3EWG3 89 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM25CB3EWG5 89 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM25GB3EWG6 89 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 SUSD5O60279 629 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 KRT8P05787 483 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 POU2F1P14859 743 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 CXCR1P25024 350 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 EGR4Q05215 589 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 MICAQ29983 383 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 PRICKLE2Q7Z3G6 844 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 CBR4Q8N4T8 237 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 TMEM239Q8WW34 195 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 DEFB127Q9H1M4 99 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 MEPEQ9NQ76 525 aaPredicted RBP24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 TMCC3Q9ULS5 477 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 PCDHGB7Q9Y5F8 929 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 LIPGQ9Y5X9 500 aa24.82■■□□□ 1.56
SMARCD3-201ENST00000262188 LRRN3E7EW58 273 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 SHOXO15266 292 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 OR10H3O60404 316 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 THRBP10828 461 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 SHC1P29353 583 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 KCTD8Q6ZWB6 473 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 ZDHHC13Q8IUH4 622 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 LURAP1LQ8IV03 231 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 OR10G2Q8NGC3 310 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 LILRB1Q8NHL6 650 aaPredicted RBP24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 SLC6A15Q9H2J7 730 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 SLC6A5Q9Y345 797 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 PCDHGB6Q9Y5F9 930 aa24.81■■□□□ 1.56
SMARCD3-201ENST00000262188 OR2M5A3KFT3 312 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 H3BML4 177 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 CCNB2O95067 398 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 SMIM11AP58511 58 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 B3GALT5-AS1P59052 145 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 KRR1Q13601 381 aaKnown RBP24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 ACOT11Q8WXI4 607 aaPredicted RBP24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 NR4A3Q92570 626 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 MRGPRX4Q96LA9 322 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 GPA33Q99795 319 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNF426Q9BUY5 554 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 C12orf4Q9NQ89 552 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 USP24Q9UPU5 2620 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 UGT2A1Q9Y4X1 527 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 ETV2O00321 342 aaPredicted RBP24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 EI24O14681 340 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 FUT1P19526 365 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 SLC25A53Q5H9E4 307 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 FEVQ99581 238 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 TNFRSF10DQ9UBN6 386 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 B4GALT7Q9UBV7 327 aa24.8■■□□□ 1.56
SMARCD3-201ENST00000262188 GASTP01350 101 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 GPR4P46093 362 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 TMEM44Q2T9K0 475 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNF770Q6IQ21 691 aaPredicted RBP24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM122CQ6P4D5 195 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 GTPBP8Q8N3Z3 284 aaPredicted RBP24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 AQP11Q8NBQ7 271 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 SMPDL3BQ92485 455 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 GTPBP3Q969Y2 492 aaKnown RBP24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 ZBTB8AQ96BR9 441 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM46AQ96IP4 442 aaKnown RBP24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNF337Q9Y3M9 751 aa24.79■■□□□ 1.56
SMARCD3-201ENST00000262188 A0A087WZY1 265 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNHIT1O43257 154 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 RASAL1O95294 804 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 PNMTP11086 282 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 CBLP22681 906 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 CDK10Q15131 360 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ZBTB49Q6ZSB9 765 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ZER1Q7Z7L7 766 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 KTI12Q96EK9 354 aaPredicted RBP24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 NIPSNAP1Q9BPW8 284 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ANKRD19PQ9H560 264 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 HHATLQ9HCP6 504 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 CHRNA9Q9UGM1 479 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNF407Q9C0G0 2248 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 SFTPDP35247 375 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 NR4A2P43354 598 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 STARP49675 285 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 DAPP51397 102 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 AP2S1P53680 142 aaPredicted RBP24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 CRYZQ08257 329 aaKnown RBP24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 LY6DQ14210 128 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ST3GAL2Q16842 350 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 HYAL4Q2M3T9 481 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 PGBD2Q6P3X8 592 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 MBOAT2Q6ZWT7 520 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms