RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 LMAN2Q12907 356 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 LASP1Q14847 261 aaKnown RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 C22orf39Q6P5X5 142 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 Q6ZNB5 142 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 HSD11B1LQ7Z5J1 315 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 OR1S2Q8NGQ3 325 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 OR1J4Q8NGS1 313 aa18.81■□□□□ 0.6
RARA-201ENST00000254066 MRPL48Q96GC5 212 aaKnown RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 QRSL1Q9H0R6 528 aaKnown RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 SEBOXQ9HB31 216 aaPredicted RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 ZNF223Q9UK11 482 aaPredicted RBP18.81■□□□□ 0.6
RARA-201ENST00000254066 ARGFXA6NJG6 315 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 TMPRSS11DO60235 418 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 GLSO94925 669 aaPredicted RBP18.8■□□□□ 0.6
RARA-201ENST00000254066 OR2T7P0C7T2 308 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 BDKRB2P30411 391 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 PTGFRP43088 359 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 NCBP2P52298 156 aaKnown RBP eCLIP18.8■□□□□ 0.6
RARA-201ENST00000254066 TMEM115Q12893 351 aaPredicted RBP18.8■□□□□ 0.6
RARA-201ENST00000254066 C21orf62-AS1Q17RA5 79 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 C1orf53Q5VUE5 145 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 SLC6A19Q695T7 634 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 H3F3CQ6NXT2 135 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 OR4C16Q8NGL9 310 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 OR2T27Q8NH04 317 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 GLYATL1Q969I3 302 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 TRMT2BQ96GJ1 504 aaKnown RBP18.8■□□□□ 0.6
RARA-201ENST00000254066 CRB3Q9BUF7 120 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 TMEM185BQ9H7F4 350 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 MYOZ1Q9NP98 299 aaPredicted RBP18.8■□□□□ 0.6
RARA-201ENST00000254066 NOX4Q9NPH5 578 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 LHX9Q9NQ69 397 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 OR5V1Q9UGF6 321 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 TRBV2A0A0J9YWF9 115 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 WRBO00258 174 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 SCAMP1O15126 338 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 HEXBP07686 556 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 PRKAG1P54619 331 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 CXADRP78310 365 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 PDZK1IP1Q13113 114 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 IRF4Q15306 451 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 TMEM220Q6QAJ8 160 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 SLC25A28Q96A46 364 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 AIF1LQ9BQI0 150 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 RIOK2Q9BVS4 552 aaKnown RBP18.8■□□□□ 0.6
RARA-201ENST00000254066 UPB1Q9UBR1 384 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 HS3ST2Q9Y278 367 aa18.8■□□□□ 0.6
RARA-201ENST00000254066 C5orf52A6NGY3 159 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 IL9P15248 144 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 ABOP16442 354 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 Q6ZVL8 140 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 BEST3Q8N1M1 668 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 FIBINQ8TAL6 211 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 LMAN2LQ9H0V9 348 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 ZDHHC6Q9H6R6 413 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 SLC7A7Q9UM01 511 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 PMS2P1A4D2B8 440 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 SLC25A12O75746 678 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 SSBP1Q04837 148 aaKnown RBP18.79■□□□□ 0.6
RARA-201ENST00000254066 PCGF3Q3KNV8 242 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 ACOT7LQ6ZUV0 252 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 SSX6Q7RTT6 188 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.79■□□□□ 0.6
RARA-201ENST00000254066 ZDHHC12Q96GR4 267 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 OR7D2Q96RA2 312 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 BBS4Q96RK4 519 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 WDR13Q9H1Z4 485 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 NIT2Q9NQR4 276 aa18.79■□□□□ 0.6
RARA-201ENST00000254066 DUSP11O75319 330 aaKnown RBP18.78■□□□□ 0.6
RARA-201ENST00000254066 ERV3-1Q14264 604 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 RNF212Q495C1 297 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 TP53I3Q53FA7 332 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 LY6G6FQ5SQ64 297 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 FAM109BQ6ICB4 259 aaPredicted RBP18.78■□□□□ 0.6
RARA-201ENST00000254066 C11orf87Q6NUJ2 197 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 SLC39A5Q6ZMH5 540 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 SLC43A2Q8N370 569 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 POMGNT2Q8NAT1 580 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 RPS4Y2Q8TD47 263 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 C2CD4CQ8TF44 421 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 ARL11Q969Q4 196 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
RARA-201ENST00000254066 CNTNAP3BQ96NU0 1288 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 ZNF471Q9BX82 626 aaPredicted RBP18.78■□□□□ 0.6
RARA-201ENST00000254066 DPH1Q9BZG8 443 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 EGLN1Q9GZT9 426 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 STARD7Q9NQZ5 370 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 IRAK3Q9Y616 596 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 MYADML2A6NDP7 307 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 PIN1P1O15428 100 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 HTR3BO95264 441 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 AKAIN1P0CW23 69 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 PRR5P85299 388 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 FUT10Q6P4F1 479 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 USP53Q70EK8 1073 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 RTN4RL1Q86UN2 441 aaPredicted RBP18.78■□□□□ 0.6
RARA-201ENST00000254066 LRFN5Q96NI6 719 aa18.78■□□□□ 0.6
RARA-201ENST00000254066 OR5H14A6NHG9 310 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms