RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MRPS18AQ9NVS2 196 aaKnown RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 NTMQ9P121 344 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ATXN7L1Q9ULK2 861 aaPredicted RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SLC27A6Q9Y2P4 619 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SLC6A5Q9Y345 797 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SPACA6W5XKT8 324 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 TRIOBPQ9H2D6 2365 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 SEC14L5O43304 696 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 RDH16O75452 317 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 CT62P0C5K7 136 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 AQP2P41181 271 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 MAT1AQ00266 395 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 DMRTC1Q5HYR2 192 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 SLC25A30Q5SVS4 291 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 B3GNTL1Q67FW5 361 aaPredicted RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 MRM1Q6IN84 353 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 LRRN1Q6UXK5 716 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM64Q6YI46 380 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 MAMSTRQ6ZN01 415 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 LRRC69Q6ZNQ3 347 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 JAZF1Q86VZ6 243 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 STPG2Q8N412 459 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 MRPL43Q8N983 215 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 OR11G2Q8NGC1 345 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 OR4D10Q8NGI6 311 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 OR10AC1Q8NH08 325 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 BRIX1Q8TDN6 353 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 RBM18Q96H35 190 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 PTDSS2Q9BVG9 487 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 A0A0G2JK05 382 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 PLPP2O43688 288 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 NFATC1O95644 943 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 IGF2P01344 180 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 LPLP06858 475 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 DBIP07108 87 aaKnown RBP11□□□□□ -0.65
USHBP1-201ENST00000252597 CISD3P0C7P0 127 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 TAS2R43P59537 309 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 FAM78AQ5JUQ0 283 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 LNX2Q8N448 690 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM52Q8NDY8 209 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 PCDHGA5Q9Y5G8 931 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 V9GY05 133 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 FRYLO94915 3013 aa11□□□□□ -0.65
USHBP1-201ENST00000252597 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CCDC85CA6NKD9 419 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 M0QYG6 137 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 HRKO00198 91 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CTSVO60911 334 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 RBBP9O75884 186 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ZFPL1O95159 310 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 KAT7O95251 611 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ACHEP22303 614 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NUDT1P36639 197 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 MNDAP41218 407 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CDK5R1Q15078 307 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 OR10K2Q6IF99 312 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PRSS42Q7Z5A4 293 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PRR22Q8IZ63 422 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NSMAFQ92636 917 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 FGF11Q92914 225 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PGLYRP3Q96LB9 341 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 B3GNT4Q9C0J1 378 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 MKKSQ9NPJ1 570 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 MED17Q9NVC6 651 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NCDNQ9UBB6 729 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CAMK2AQ9UQM7 478 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NOTCH4Q99466 2003 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 hCG_1807616A0A1W2PRN6 198 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ADAM11O75078 769 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SULT1A3P0DMM9 295 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SULT1A4P0DMN0 295 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PEBP1P30086 187 aaKnown RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CCKBRP32239 447 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ART1P52961 327 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 TAGLNQ01995 201 aaKnown RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CBFBQ13951 182 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 STPG1Q5TH74 334 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 METTL11BQ5VVY1 283 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM88Q6PEY1 159 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 VN1R4Q7Z5H5 301 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 TPRA1Q86W33 373 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 OR51S1Q8NGJ8 323 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 WNT2BQ93097 391 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 KISS1RQ969F8 398 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 PPP1R14AQ96A00 147 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 SPACA7Q96KW9 195 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 TIMP4Q99727 224 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 KXD1Q9BQD3 176 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CD93Q9NPY3 652 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NRIP3Q9NQ35 241 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 TAS2R3Q9NYW6 316 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
USHBP1-201ENST00000252597 STON1Q9Y6Q2 735 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 FAM186AA6NE01 2351 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 DCDC2BA2VCK2 349 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CDC14CA4D256 554 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 CSTAP01040 98 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 NID1P14543 1247 aa10.99□□□□□ -0.65
USHBP1-201ENST00000252597 C4BPBP20851 252 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms