RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PRKAR1BP31321 381 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 UBE2MP61081 183 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 AGERQ15109 404 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 FAM69AQ5T7M9 428 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TTLL10Q6ZVT0 673 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF440Q8IYI8 595 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF680Q8NEM1 530 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR2AJ1Q8NGZ0 328 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ADAM18Q9Y3Q7 739 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 C17orf105B2RV13 164 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SELENOFO60613 162 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF28P17035 718 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SLC2A5P22732 501 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PTBP1P26599 531 aaKnown RBP eCLIP4.26□□□□□ -1.731e-8■■■■■ 35
VPS13C-201ENST00000249837 RAP2BP61225 183 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 EIF4EBP2Q13542 120 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 HTR4Q13639 388 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF77Q15935 545 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.26□□□□□ -1.735e-6■■■□□ 14.8
VPS13C-201ENST00000249837 OR5M10Q6IEU7 315 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 FBXL6Q8N531 539 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PATE1Q8WXA2 126 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TEAD3Q99594 435 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 METTL7AQ9H8H3 244 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CPNE7Q9UBL6 633 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 POLHQ9Y253 713 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0A6YYJ9 748 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF780AO75290 641 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GJA4P35212 333 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 VASPP50552 380 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 EIF2B1Q14232 305 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF417Q8TAU3 575 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PAQR8Q8TEZ7 354 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 MS4A6EQ96DS6 147 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PARPBPQ9NWS1 579 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 HCFC2Q9Y5Z7 792 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CD6P30203 668 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CCR9P51686 369 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 KIR2DS3Q14952 304 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 UBXN2BQ14CS0 331 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM17Q86X19 198 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SLC35F3Q8IY50 421 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GTPBP8Q8N3Z3 284 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 STEAP2Q8NFT2 490 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SFXN2Q96NB2 322 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SFXN1Q9H9B4 322 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TEX51A0A1B0GUA7 166 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TCRBV21S2A2A0A5A6 115 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RPS27P42677 84 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PCBP3P57721 371 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TRMT12Q53H54 448 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 EOGTQ5NDL2 527 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 OR7E24Q6IFN5 339 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ULK3Q6PHR2 472 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 NDUFAF7Q7L592 441 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CMTM4Q8IZR5 234 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TOR1AIP2Q8NFQ8 470 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 OR8D4Q8NGM9 314 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ABHD1Q96SE0 405 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DZANK1Q9NVP4 752 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PEX12O00623 359 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RORAP35398 523 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TCTN1Q2MV58 587 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM205Q6UW68 189 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CNRIP1Q96F85 164 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RNF170Q96K19 258 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 NRSN2Q9GZP1 204 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PITHD1Q9GZP4 211 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 OR52A5Q9H2C5 316 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 LRIT1Q9P2V4 623 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 E9PI62 339 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 M0QYG6 137 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PNMTP11086 282 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 POU4F2Q12837 409 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 IRF3Q14653 427 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DUSP6Q16828 381 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF585AQ6P3V2 769 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DPY19L4Q7Z388 723 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RDH10Q8IZV5 341 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GCDHQ92947 438 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RNF32Q9H0A6 362 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0G2JMZ2 1700 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 LRRC37A2A6NM11 1700 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 KDM4EB2RXH2 506 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 FGF17O60258 216 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 APBB3O95704 486 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TRHRP34981 398 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 NR0B1P51843 470 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 INSL4Q14641 139 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RPL22L1Q6P5R6 122 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 IDO2Q6ZQW0 420 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TRMT61AQ96FX7 289 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DHRS1Q96LJ7 313 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SDF2Q99470 211 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SEMA4CQ9C0C4 833 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ING1Q9UK53 422 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 C14orf166Q9Y224 244 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 OR2W5A6NFC9 320 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF736B4DX44 427 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms