RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 C9orf135Q5VTT2 229 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 PAQR6Q6TCH4 344 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 KLHL24Q6TFL4 600 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 ZNF440Q8IYI8 595 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 DPP10Q8N608 796 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 C1QTNF6Q9BXI9 259 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 AMBRA1Q9C0C7 1298 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 RAD21L1Q9H4I0 556 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 SLC17A5Q9NRA2 495 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 SLC7A10Q9NS82 523 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 ATP23Q9Y6H3 246 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 CAPN7Q9Y6W3 813 aa11.33□□□□□ -0.6
APOBEC3A-201ENST00000249116 FREM1Q5H8C1 2179 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 DNHD1Q96M86 4753 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 PRR14LQ5THK1 2151 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 H7C417 338 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 PDLIM1O00151 329 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 FBP2O00757 339 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 CCDC22O60826 627 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 WNT11O96014 354 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 GPIP06744 558 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 DBIP07108 87 aaKnown RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 CHRM4P08173 479 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 ETFAP13804 333 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 CXCR1P25024 350 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 CRATP43155 626 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 PRPS1P60891 318 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 DSTNP60981 165 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 EPS8Q12929 822 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 FADDQ13158 208 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 SLC17A1Q14916 467 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 MRPL2Q5T653 305 aaKnown RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 DLEU7Q6UYE1 221 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 WDR31Q8NA23 367 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 FAM168AQ92567 244 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 GMEB1Q9Y692 573 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
APOBEC3A-201ENST00000249116 CSPG4Q6UVK1 2322 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 CHD3Q12873 2000 aaKnown RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 ELOA3DA6NLF2 546 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 RNF212BA8MTL3 300 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 GPRIN2O60269 458 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 CSF3P09919 207 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 PPIBP23284 216 aaKnown RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 MPGP29372 298 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 APOBEC3AP31941 199 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 COPZ1P61923 177 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 NFYCQ13952 458 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 RGNQ15493 299 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 ELOA3BQ3SY89 546 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 TSPO2Q5TGU0 170 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 REP15Q6BDI9 236 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 B3GLCTQ6Y288 498 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 AAED1Q7RTV5 226 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 POMGNT2Q8NAT1 580 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 ELOA3Q8NG57 546 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 CPPED1Q9BRF8 314 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 TAPBPLQ9BX59 468 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 ADAM19Q9H013 955 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 IKZF5Q9H5V7 419 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 PIF1Q9H611 641 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 THUMPD1Q9NXG2 353 aaKnown RBP11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 CALML5Q9NZT1 146 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 P2RX2Q9UBL9 471 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
APOBEC3A-201ENST00000249116 ZC3H12DA2A288 527 aaKnown RBP11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 SHOX2O60902 331 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 KRT33AO76009 404 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 BCHEP06276 602 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 BMP2P12643 396 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 PAX7P23759 505 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 EFNA4P52798 201 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 VLDLRP98155 873 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 CEACAM7Q14002 265 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 OR7A5Q15622 319 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 MAPK11Q15759 364 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 TRMT5Q32P41 509 aaKnown RBP11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 LIN52Q52LA3 116 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 PIGWQ7Z7B1 504 aa11.3□□□□□ -0.6
APOBEC3A-201ENST00000249116 C10orf111Q8N326 155 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms