RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
VPREB3-201ENST00000248948 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
VPREB3-201ENST00000248948 TRAPPC13A5PLN9 417 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 CCT8L1PA6NM43 557 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 RAF1P04049 648 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 IGHV1-2P23083 117 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 SLC7A2P52569 658 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 LRRC23Q53EV4 343 aaPredicted RBP11.28□□□□□ -0.6
VPREB3-201ENST00000248948 TIMM23BQ5SRD1 257 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 ANKRD34AQ69YU3 496 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 C22orf34Q6ZV56 151 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.28□□□□□ -0.6
VPREB3-201ENST00000248948 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 SLC15A3Q8IY34 581 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
VPREB3-201ENST00000248948 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 HSD17B8Q92506 261 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 PIK3IP1Q96FE7 263 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 MPP4Q96JB8 637 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 NGBQ9NPG2 151 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 USP22Q9UPT9 525 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
VPREB3-201ENST00000248948 PRRC2AP48634 2157 aaKnown RBP11.28□□□□□ -0.6
VPREB3-201ENST00000248948 A0A1W2PPR1 153 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 OR5H1A6NKK0 313 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 CPSF4LA6NMK7 179 aaKnown RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 M0R082 166 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 PDLIM1O00151 329 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 NME4O00746 187 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 AKAP8O43823 692 aaKnown RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 DCTN3O75935 186 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LYZL6O75951 148 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 GGT1P19440 569 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LOXP28300 417 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 KDELR2P33947 212 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 NTF4P34130 210 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 GYS2P54840 703 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LIPEQ05469 1076 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 TAB1Q15750 504 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 CYBRD1Q53TN4 286 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SEZ6L2Q6UXD5 910 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 CREB3L2Q70SY1 520 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ABHD12BQ7Z5M8 362 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 PIGWQ7Z7B1 504 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LSRQ86X29 649 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 CARM1Q86X55 608 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 UBE2J2Q8N2K1 259 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 C17orf78Q8N4C9 275 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF433Q8N7K0 673 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF417Q8TAU3 575 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 RNF217Q8TC41 542 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 NRGNQ92686 78 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 TAAR8Q969N4 342 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF775Q96BV0 537 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SLC41A3Q96GZ6 507 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF587Q96SQ5 575 aaPredicted RBP11.27□□□□□ -0.61
VPREB3-201ENST00000248948 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 ASPNQ9BXN1 380 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SLCO5A1Q9H2Y9 848 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SPAG4Q9NPE6 437 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 B3GAT1Q9P2W7 334 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 SH3GLB1Q9Y371 365 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 PRR14LQ5THK1 2151 aa11.27□□□□□ -0.61
VPREB3-201ENST00000248948 LOC102725191A0A1B0GVB3 256 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 KLF4O43474 513 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 ATE1O95260 518 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 LYPD3O95274 346 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 BGLAPP02818 100 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 THRBP10828 461 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 DNASE1P24855 282 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 GRPRP30550 384 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 TGFBR3Q03167 851 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 FAPQ12884 760 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 TESK1Q15569 626 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 TSC22D1Q15714 1073 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 OR7E24Q6IFN5 339 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 C20orf204Q6ZNR8 217 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
VPREB3-201ENST00000248948 AAED1Q7RTV5 226 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 EPHX4Q8IUS5 362 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 LZICQ8WZA0 190 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 OXGR1Q96P68 337 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF385AQ96PM9 386 aaKnown RBP11.26□□□□□ -0.61
VPREB3-201ENST00000248948 LRRC37BQ96QE4 947 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms