RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NR0B1P51843 470 aaKnown RBP14.4□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.4□□□□□ -0.1
LRFN1-201ENST00000248668 KLHL26Q53HC5 615 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 LEG1Q6P5S2 330 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 LINC00114Q6XXX2 140 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 C16orf47Q6ZP98 133 aaPredicted RBP14.4□□□□□ -0.1
LRFN1-201ENST00000248668 SAMD12Q8N8I0 201 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 ZNF511Q8NB15 262 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 C19orf18Q8NEA5 215 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 SLC2A12Q8TD20 617 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 ACOXLQ9NUZ1 547 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 GMEB2Q9UKD1 530 aa14.4□□□□□ -0.1
LRFN1-201ENST00000248668 EFCAB7A8K855 629 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ATP6V1G2-DDX39BF2Z307 99 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PIAS2O75928 621 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SDHBP21912 280 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 NUDT1P36639 197 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 RAB25P57735 213 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 TOMM34Q15785 309 aaPredicted RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ACSM3Q53FZ2 586 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SLC35F3Q8IY50 421 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 OR4M2Q8NGB6 313 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 DPYSL5Q9BPU6 564 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PCNX3Q9H6A9 2034 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 TP53BP1Q12888 1972 aaPredicted RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 HCRTR2O43614 444 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 MST1P26927 711 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 CSF2RBP32927 897 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 DMWDQ09019 674 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 GPR50Q13585 617 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SERTAD2Q14140 314 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PON3Q15166 354 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 FAM109AQ8N4B1 249 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 GDPD1Q8N9F7 314 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ENKURQ8TC29 256 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 TRIM63Q969Q1 353 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ZNF285Q96NJ3 590 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 CNN2Q99439 309 aaKnown RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 WACQ9BTA9 647 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 NUDT9Q9BW91 350 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 UBQLN4Q9NRR5 601 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 MKL2Q9ULH7 1088 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 IGHV1OR21-1A0A087WYE8 117 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PSKH1P11801 424 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 INPP1P49441 399 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 EVX1P49640 407 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 PSMD4P55036 377 aaKnown RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ZNF57Q68EA5 555 aaPredicted RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 LANCL3Q6ZV70 420 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ASB18Q6ZVZ8 466 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SLC35F2Q8IXU6 374 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 GPR135Q8IZ08 494 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 THAP3Q8WTV1 239 aaPredicted RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 MSANTD3Q96H12 275 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 NUDT22Q9BRQ3 303 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SLC22A4Q9H015 551 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SYNDIG1Q9H7V2 258 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 SRA1Q9HD15 236 aaKnown RBP14.39□□□□□ -0.11
LRFN1-201ENST00000248668 NANSQ9NR45 359 aa14.39□□□□□ -0.11
LRFN1-201ENST00000248668 H0YIG0 161 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 OR7A10O76100 309 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 KIR2DL3P43628 341 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 TSSK4Q6SA08 328 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 MARCH3Q86UD3 253 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 KTI12Q96EK9 354 aaPredicted RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 PELI1Q96FA3 418 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 PGLYRP3Q96LB9 341 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 ENAMQ9NRM1 1142 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 MEIOCA2RUB1 952 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 RPP14O95059 124 aaKnown RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 EIF4EP06730 217 aaKnown RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 SPI1P17947 270 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 MYL9P24844 172 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 GRK6P43250 576 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 RPS5P46782 204 aaKnown RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 HSD11B2P80365 405 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 LCN1P1Q5VSP4 162 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 C1QL3Q5VWW1 255 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 SLC25A45Q8N413 288 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 NPEPL1Q8NDH3 523 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 SETD6Q8TBK2 473 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 JAM3Q9BX67 310 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 HDHD2Q9H0R4 259 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 PPP1R3EQ9H7J1 279 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 FSCN3Q9NQT6 498 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 BAIAP2Q9UQB8 552 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 ZNF337Q9Y3M9 751 aa14.38□□□□□ -0.11
LRFN1-201ENST00000248668 MN1Q10571 1320 aaPredicted RBP14.38□□□□□ -0.11
LRFN1-201ENST00000248668 AKR7A2O43488 359 aa14.37□□□□□ -0.11
LRFN1-201ENST00000248668 GPANK1O95872 356 aa14.37□□□□□ -0.11
LRFN1-201ENST00000248668 CDKN2AP42771 156 aaKnown RBP14.37□□□□□ -0.11
LRFN1-201ENST00000248668 CTXN1P60606 82 aa14.37□□□□□ -0.11
LRFN1-201ENST00000248668 OR5M10Q6IEU7 315 aa14.37□□□□□ -0.11
LRFN1-201ENST00000248668 GPALPP1Q8IXQ4 340 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms