RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 REP15Q6BDI9 236 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 ULK3Q6PHR2 472 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 NET1Q7Z628 596 aaPredicted RBP18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 LRRC75A-AS1Q8N1F1 130 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 ZNF611Q8N823 705 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 FBXW5Q969U6 566 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 SLC47A1Q96FL8 570 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 MRGBPQ9NV56 204 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 SEC14L4Q9UDX3 406 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 RASD1Q9Y272 281 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 C2CD3Q4AC94 2353 aa18.6■□□□□ 0.57
HCFC1R1-201ENST00000248089 IGKV1D-42A0A075B6H8 117 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 M0QX08 132 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 PDLIM1O00151 329 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 MRASO14807 208 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 VAMP5O95183 116 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 CDH2P19022 906 aaPredicted RBP18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 CBLP22681 906 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 PCGF2P35227 344 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 IL1RL1Q01638 556 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 MAPRE2Q15555 327 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 GABRA6Q16445 453 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 FAM91A1Q658Y4 838 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 OR7E24Q6IFN5 339 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 CREB3L2Q70SY1 520 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 SSX8Q7RTT4 187 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 SNX32Q86XE0 403 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 SLC30A8Q8IWU4 369 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 KDM8Q8N371 416 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 LILRB1Q8NHL6 650 aaPredicted RBP18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 TAAR8Q969N4 342 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 CXorf56Q9H5V9 222 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 MED4Q9NPJ6 270 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 SAR1AQ9NR31 198 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 LAMP3Q9UQV4 416 aa18.59■□□□□ 0.57
HCFC1R1-201ENST00000248089 TRAV36DV7A0A075B6V5 113 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 A0A0B4J2E0 115 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 A0A1B0GX12 115 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 M0R082 166 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 ABCD4O14678 606 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 PTH2RP49190 550 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 SELENOPP49908 381 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 TGFBR3Q03167 851 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 LGALS3BPQ08380 585 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 DUSP7Q16829 419 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 ZNF672Q499Z4 452 aaPredicted RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 RABL3Q5HYI8 236 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 FAM69AQ5T7M9 428 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 NANOGP8Q6NSW7 305 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 NIPAL3Q6P499 406 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 C5orf46Q6UWT4 87 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 PATL1Q86TB9 770 aaKnown RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 POMGNT2Q8NAT1 580 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 VANGL1Q8TAA9 524 aaPredicted RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 ZNF417Q8TAU3 575 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 SLC26A7Q8TE54 656 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 LRRC58Q96CX6 371 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 ALKBH3Q96Q83 286 aaPredicted RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 ZNF587Q96SQ5 575 aaPredicted RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 MCHR1Q99705 422 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 NANOGQ9H9S0 305 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 KLHL14Q9P2G3 628 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 SLC25A15Q9Y619 301 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 USF3Q68DE3 2245 aa18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 HEATR1Q9H583 2144 aaKnown RBP18.58■□□□□ 0.56
HCFC1R1-201ENST00000248089 BBIP1A8MTZ0 92 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 M0R1B8 84 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 AIM2O14862 343 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 OR2T1O43869 369 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 TPST2O60704 377 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 LGI1O95970 557 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 MPGP29372 298 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 GRPRP30550 384 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 CDH11P55287 796 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 CDH12P55289 794 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 INTS11Q5TA45 600 aaKnown RBP18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 KLHL24Q6TFL4 600 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 ABHD12BQ7Z5M8 362 aaPredicted RBP18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 YTHDF3Q7Z739 585 aaKnown RBP18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 EPHX4Q8IUS5 362 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 C1orf162Q8NEQ5 155 aaPredicted RBP18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 GPR32P1Q8NGA4 272 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 TAMM41Q96BW9 452 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 MUS81Q96NY9 551 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 ARHGDIGQ99819 225 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 C1QTNF6Q9BXI9 259 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 CCDC134Q9H6E4 229 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 EVA1AQ9H8M9 152 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 DLL4Q9NR61 685 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 CAPN7Q9Y6W3 813 aa18.57■□□□□ 0.56
HCFC1R1-201ENST00000248089 A0A087WUJ7 227 aa18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 LOC100653049A0A140TA62 436 aa18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 CPSF4LA6NMK7 179 aaKnown RBP18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 ZNF587BE7ETH6 402 aa18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 FXYD1O00168 92 aa18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 KRT34O76011 436 aa18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 NQO1P15559 274 aaKnown RBP18.56■□□□□ 0.56
HCFC1R1-201ENST00000248089 ZNF43P17038 809 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms