RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SLC7A6Q92536 515 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 RASD2Q96D21 266 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 SNX18Q96RF0 628 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 YIPF2Q9BWQ6 316 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 KLHL1Q9NR64 748 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ABRACLQ9P1F3 81 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 COPS3Q9UNS2 423 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 A0A0G2JMP0 313 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 A0A0X1KG70 313 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 NOTOA8MTQ0 251 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 GLB1P16278 677 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 SDHAP31040 664 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 PITPNBP48739 271 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 CSNK1EP49674 416 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ARL4DP49703 201 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 GPLD1P80108 840 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 EBPQ15125 230 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ALG10Q5BKT4 473 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 YOD1Q5VVQ6 348 aaPredicted RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 KMT5CQ86Y97 462 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 SAMD12Q8N8I0 201 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 OR4M2Q8NGB6 313 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 OR4M1Q8NGD0 313 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 DAZLQ92904 295 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF524Q96C55 264 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 CLIP3Q96DZ5 547 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 Q96M85 177 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 MOGAT1Q96PD6 335 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ADOQ96SZ5 270 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 MARVELD1Q9BSK0 173 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 NUDT9Q9BW91 350 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 FOXQ1Q9C009 403 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF304Q9HCX3 659 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 DHCR7Q9UBM7 475 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 A0A0B4J293 547 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 TEX13CA0A0J9YWL9 993 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 A0A1W2PRG6 482 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 A8MUA0 341 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 BLOC1S5-TXNDC5H3BN57 136 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 DUX1O43812 170 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 EIF4E2O60573 245 aaKnown RBP14.73□□□□□ -0.05
UBE3D-201ENST00000237186 SELENOFO60613 162 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 EFNA3P52797 238 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 CLDN20P56880 219 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 BCL2A1Q16548 175 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 SLC25A35Q3KQZ1 300 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 GXYLT1Q4G148 440 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 HACD4Q5VWC8 232 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 PYHIN1Q6K0P9 492 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 LEG1Q6P5S2 330 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 PRSS42Q7Z5A4 293 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 KCTD20Q7Z5Y7 419 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 SPEM1Q8N4L4 309 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 OR13C5Q8NGS8 318 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 TRMT10AQ8TBZ6 339 aaKnown RBP14.73□□□□□ -0.05
UBE3D-201ENST00000237186 TP53INP1Q96A56 240 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 RNF31Q96EP0 1072 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 ALG12Q9BV10 488 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 OR2B2Q9GZK3 357 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 TRIOO75962 3097 aa14.73□□□□□ -0.05
UBE3D-201ENST00000237186 TRBV2A0A0J9YWF9 115 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 A0A1B0GTQ1 180 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 FAM240BA0A1B0GVZ2 78 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 ALG1L2C9J202 215 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 MAGEB4O15481 346 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TSPAN2O60636 221 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TMEM127O75204 238 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TRIM3O75382 744 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-201ENST00000237186 EPXP11678 715 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TACR3P29371 465 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 NR4A2P43354 598 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 CCR4P51679 360 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 NKX2-5P52952 324 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-201ENST00000237186 CTXN1P60606 82 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TBRG1Q3YBR2 411 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 SLC6A19Q695T7 634 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 C9orf40Q8IXQ3 194 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 GPR135Q8IZ08 494 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 UBE2J2Q8N2K1 259 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 SLC25A45Q8N413 288 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 HAVCR2Q8TDQ0 301 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 TRIM63Q969Q1 353 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 SHDQ96IW2 340 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 CMTM3Q96MX0 182 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 LPAR4Q99677 370 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 WACQ9BTA9 647 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 ACOXLQ9NUZ1 547 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 WNT16Q9UBV4 365 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 GNG8Q9UK08 70 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 FLRT2O43155 660 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 ICOSLGO75144 302 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 SLC43A1O75387 559 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 GIMD1P0DJR0 217 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 FOLR1P15328 257 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 FBLP22087 321 aaKnown RBP14.72□□□□□ -0.05
UBE3D-201ENST00000237186 EDNRAP25101 427 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF117Q03924 483 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 SLC16A9Q7RTY1 509 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 JAZF1Q86VZ6 243 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms