RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 BEND4Q6ZU67 534 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 LUZP2Q86TE4 346 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 COMTD1Q86VU5 262 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 TUSC5Q8IXB3 177 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 RNF148Q8N7C7 305 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 RELL2Q8NC24 303 aaPredicted RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 ABHD3Q8WU67 409 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 NSMCE2Q96MF7 247 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 HS6ST2Q96MM7 605 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 KLHL4Q9C0H6 718 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 PLSCR4Q9NRQ2 329 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 CD300AQ9UGN4 299 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 EGFL7Q9UHF1 273 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 RASD1Q9Y272 281 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 FAM32AQ9Y421 112 aaKnown RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 CORINQ9Y5Q5 1042 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 PHF3Q92576 2039 aaKnown RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 NIPBLQ6KC79 2804 aaeCLIP10.05□□□□□ -0.81e-7■□□□□ 10
SF3B6-201ENST00000233468 IGKV3D-15A0A087WSY6 115 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 IGHV3-15A0A0B4J1V0 119 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 ZC3H12DA2A288 527 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 GYG2O15488 501 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 TPST2O60704 377 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 MT-ATP6P00846 226 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 IMPDH2P12268 514 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 AGTR1P30556 359 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 CPOXP36551 454 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 RBM34P42696 430 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 RPS5P46782 204 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 OR1E2P47887 323 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 SLC16A1P53985 500 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 H3F3AP84243 136 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 TESK1Q15569 626 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 FXNQ16595 210 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 MTX3Q5HYI7 312 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 OTUD3Q5T2D3 398 aaPredicted RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 ABLIM2Q6H8Q1 611 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 VWA1Q6PCB0 445 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 MEX3BQ6ZN04 569 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 RBM45Q8IUH3 476 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 C10orf53Q8N6V4 93 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 SLC25A36Q96CQ1 311 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 HSH2DQ96JZ2 352 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 PRRC1Q96M27 445 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 PSD2Q9BQI7 771 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 FNDC11Q9BVV2 318 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 ASPNQ9BXN1 380 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 RSPO3Q9BXY4 272 aaPredicted RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 ENKD1Q9H0I2 346 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 DCAF13Q9NV06 445 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 SLC7A7Q9UM01 511 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 B3GALT5Q9Y2C3 310 aa10.04□□□□□ -0.8
SF3B6-201ENST00000233468 NOSIPQ9Y314 301 aaKnown RBP10.04□□□□□ -0.8
SF3B6-201ENST00000233468 AQP7P3A6NL99 342 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 MRPL33O75394 65 aaKnown RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 CNOT4O95628 575 aaKnown RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 HIST1H2ABP04908 130 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 T-ENOLP0DO92 83 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 POU2F1P14859 743 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 NCK1P16333 377 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 CD79BP40259 229 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 KIR2DL3P43628 341 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 EGR4Q05215 589 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 RINLQ6ZS11 566 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 H1FNTQ75WM6 255 aaPredicted RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 HIST3H2AQ7L7L0 130 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 DMRTC2Q8IXT2 367 aaPredicted RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 ZNF100Q8IYN0 542 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 SCAIQ8N9R8 606 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 OR4D11Q8NGI4 311 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 HIST1H2ACQ93077 130 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 KTI12Q96EK9 354 aaPredicted RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 PYURFQ96I23 114 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 WFDC6Q9BQY6 131 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 HDHD5Q9BXW7 423 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 TRIM15Q9C019 465 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 OPN3Q9H1Y3 402 aaPredicted RBP10.03□□□□□ -0.8
SF3B6-201ENST00000233468 RIMS3Q9UJD0 308 aa10.03□□□□□ -0.8
SF3B6-201ENST00000233468 AKAP6Q13023 2319 aa10.02□□□□□ -0.8
SF3B6-201ENST00000233468 TUBAL3A6NHL2 446 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 OR6C65A6NJZ3 312 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 C16orf97H3BN30 126 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ARPC2O15144 300 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 AKAP8O43823 692 aaKnown RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 UBOX5O94941 541 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 AKR7A3O95154 331 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 OR6A2O95222 327 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 CGAP01215 116 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 IGF2P01344 180 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 NQO1P15559 274 aaKnown RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 PPP3CBP16298 524 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF43P17038 809 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 HOXB6P17509 224 aaKnown RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TNFRSF1BP20333 461 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms