RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NQO2P16083 231 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 CSNK2A2P19784 350 aaPredicted RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 EDNRAP25101 427 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 TAF13Q15543 124 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ACOT4Q8N9L9 421 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 FAM98AQ8NCA5 519 aaKnown RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 SDR9C7Q8NEX9 313 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 OR4C6Q8NH72 309 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 DTD2Q96FN9 168 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 RHOVQ96L33 236 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 TGIF2Q9GZN2 237 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 DZANK1Q9NVP4 752 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 F5H0A9 414 aaPredicted RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 TGM5O43548 720 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ADH7P40394 386 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 C2orf68Q2NKX9 166 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 OR2B11Q5JQS5 317 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 MBOAT2Q6ZWT7 520 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 NAXDQ8IW45 347 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ELP5Q8TE02 316 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF629Q9UEG4 869 aaPredicted RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 NPTNQ9Y639 398 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 TRBV23OR9-2A0A075B6M9 112 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 OR52A4PA6NMU1 304 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 FOXK2Q01167 660 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 RPE65Q16518 533 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 KRBOX4Q5JUW0 171 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 OR6K6Q8NGW6 343 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 EDARADDQ8WWZ3 215 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 C14orf79Q96F83 325 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC35A4Q96G79 324 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC25A32Q9H2D1 315 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 KCNK6Q9Y257 313 aa13.04□□□□□ -0.32
PCDHB3-201ENST00000231130 A0A087WV48 116 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 FADS1O60427 444 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SBK2P0C263 348 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 HTR2AP28223 471 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 POU4F2Q12837 409 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 TEAD2Q15562 447 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 DCAF12L2Q5VW00 463 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 GLDNQ6ZMI3 551 aaPredicted RBP13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 WDR88Q6ZMY6 472 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 GID4Q8IVV7 300 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 TLNRD1Q9H1K6 362 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 EXOSC3Q9NQT5 275 aaKnown RBP13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 MKL2Q9ULH7 1088 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 DOCK9Q9BZ29 2069 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 A0A1B0GUH1 482 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OR2AT4A6NND4 320 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 ANXA2P07355 339 aaKnown RBP13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 LAMP2P13473 410 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 BDKRB2P30411 391 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 MPIP34949 423 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 NTHL1P78549 312 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OR7E24Q6IFN5 339 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 TMEFF1Q8IYR6 380 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 ZCCHC10Q8TBK6 192 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SAGE1Q9NXZ1 904 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OPN4Q9UHM6 478 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OR1A2Q9Y585 309 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SPEGQ15772 3267 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 IMPA2O14732 288 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 LILRB5O75023 590 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 MMP15P51511 669 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 RAG2P55895 527 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 H2BFSP57053 126 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 AP3S2P59780 193 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 CSNK1G2P78368 415 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 BTN3A2P78410 334 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 FAM111BQ6SJ93 734 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 TMED4Q7Z7H5 227 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 CAMKVQ8NCB2 501 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 DNAAF1Q8NEP3 725 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OR52E2Q8NGJ4 325 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms