RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 A6NCN8 305 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PRR23D1E9PI22 279 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 E9PI62 339 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 M0R233 179 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 HOXD4P09016 255 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 CD3GP09693 182 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PRR23D2P0DMB1 279 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 ATF1P18846 271 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 E2F1Q01094 437 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OLFML2AQ68BL7 652 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 MFSD12Q6NUT3 480 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 NLRC3Q7RTR2 1065 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 CCDC116Q8IYX3 515 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 C2orf73Q8N5S3 287 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 RPS4Y2Q8TD47 263 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 SLC35A4Q96G79 324 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 RPS6KB2Q9UBS0 482 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 SLC7A7Q9UM01 511 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PLSCR5A0PG75 271 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 FAM183AA6NL82 134 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PRICKLE3O43900 615 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 OR2A4O95047 310 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 IL5P05113 134 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PTGS2P35354 604 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 MC3RP41968 323 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 RAB28P51157 221 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PDX1P52945 283 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 RAB8AP61006 207 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 FAM27D1Q5T7N8 215 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 B3GNTL1Q67FW5 361 aaPredicted RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 FAM122CQ6P4D5 195 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 ZNF836Q6ZNA1 936 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OVCH2Q7RTZ1 564 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 NAXDQ8IW45 347 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OR10H4Q8NGA5 316 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OR11G2Q8NGC1 345 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OR2T35Q8NGX2 323 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 SMIM19Q96E16 107 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 CCDC120Q96HB5 630 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 OR2A7Q96R45 310 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 IFT27Q9BW83 186 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 REG4Q9BYZ8 158 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 CACYBPQ9HB71 228 aaKnown RBP18.86■□□□□ 0.61
SNX3-201ENST00000230085 PCOLCE2Q9UKZ9 415 aa18.86■□□□□ 0.61
SNX3-201ENST00000230085 PCNX2A6NKB5 2137 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 hCG_1807616A0A1W2PRN6 198 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 SNRPGP15A8MWD9 76 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 ERAL1O75616 437 aaKnown RBP18.85■□□□□ 0.61
SNX3-201ENST00000230085 NTN1O95631 604 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 PSMB1P20618 241 aaKnown RBP18.85■□□□□ 0.61
SNX3-201ENST00000230085 BCL6P41182 706 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 ACTA2P62736 377 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 ACTG2P63267 376 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 GGTLC2Q14390 218 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 OGFOD3Q6PK18 319 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 HMGN2P46Q86SG4 172 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 SLC35F3Q8IY50 421 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 C17orf47Q8NEP4 570 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 ADAMTS15Q8TE58 950 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 C4orf36Q96KX1 117 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 SIGLEC7Q9Y286 467 aa18.85■□□□□ 0.61
SNX3-201ENST00000230085 CIB4A0PJX0 185 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 MFSD2BA6NFX1 497 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 OR52A4PA6NMU1 304 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 C4orf51C9J302 202 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 GABARAPH6UMI1 98 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 PPM1DO15297 605 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 SSNA1O43805 119 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 ANKRD34CP0C6C1 535 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 RAP2BP61225 183 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 POU6F2P78424 691 aaPredicted RBP18.84■□□□□ 0.61
SNX3-201ENST00000230085 LSM14AQ8ND56 463 aaKnown RBP18.84■□□□□ 0.61
SNX3-201ENST00000230085 C15orf40Q8WUR7 153 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 GHSRQ92847 366 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 HCAR1Q9BXC0 346 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 KLHL31Q9H511 634 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 ING1Q9UK53 422 aaPredicted RBP18.84■□□□□ 0.61
SNX3-201ENST00000230085 CEP250Q9BV73 2442 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 PIEZO1Q92508 2521 aa18.84■□□□□ 0.61
SNX3-201ENST00000230085 CDHR4A6H8M9 788 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 ERI3O43414 337 aaKnown RBP18.83■□□□□ 0.61
SNX3-201ENST00000230085 GPRIN2O60269 458 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 FCMRO60667 390 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 PTP4A3O75365 173 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 B3GALNT1O75752 331 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 CFDP00746 253 aaPredicted RBP18.83■□□□□ 0.61
SNX3-201ENST00000230085 SLC35G4P0C7Q5 338 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 IFNGR1P15260 489 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 GDNFP39905 211 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 CCR6P51684 374 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 MAZP56270 477 aaKnown RBP18.83■□□□□ 0.61
SNX3-201ENST00000230085 OPCMLQ14982 345 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 CDK5R1Q15078 307 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 DNM1P46Q6ZS02 220 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 OR2L13Q8N349 312 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 TMEM239Q8WW34 195 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 MS4A3Q96HJ5 214 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 C10orf90Q96M02 699 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 C12orf66Q96MD2 445 aa18.83■□□□□ 0.61
SNX3-201ENST00000230085 ZNF350Q9GZX5 532 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms