RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ADGRE4PQ86SQ3 457 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 UBQLNLQ8IYU4 475 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 SLC43A2Q8N370 569 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 MEIOBQ8N635 442 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 OSTF1Q92882 214 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 SLC25A36Q96CQ1 311 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 DNAJA3Q96EY1 480 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 TNFRSF13CQ96RJ3 184 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 TAPBPLQ9BX59 468 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 MCCC2Q9HCC0 563 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ASF1BQ9NVP2 202 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 SMPD3Q9NY59 655 aaPredicted RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 TAS2R5Q9NYW4 299 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 SEC14L4Q9UDX3 406 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 B3GALT5Q9Y2C3 310 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 TRAV27A0A087WT01 109 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 LOC102725191A0A1B0GVB3 256 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 PLPP3O14495 311 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 SEC14L5O43304 696 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 RCBTB2O95199 551 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 SNAP29O95721 258 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 NUP107P57740 925 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 OR2B6P58173 313 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 PRPS1P60891 318 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 HSF1Q00613 529 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 GTF3C1Q12789 2109 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 NPRL3Q12980 569 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 PRR30Q53SZ7 412 aaPredicted RBP12.57□□□□□ -0.4
SEC61B-201ENST00000223641 RPL13AP3Q6NVV1 102 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 NHLRC1Q6VVB1 395 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 H1FNTQ75WM6 255 aaPredicted RBP12.57□□□□□ -0.4
SEC61B-201ENST00000223641 GALNT5Q7Z7M9 940 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 PM20D2Q8IYS1 436 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 C10orf53Q8N6V4 93 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 OR51A7Q8NH64 312 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 ZPLD1Q8TCW7 415 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 RELTQ969Z4 430 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
SEC61B-201ENST00000223641 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 ENKD1Q9H0I2 346 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 VCXQ9H320 206 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 OR52D1Q9H346 318 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 TNFRSF10DQ9UBN6 386 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 CDH10Q9Y6N8 788 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 ATRXP46100 2492 aa12.57□□□□□ -0.4
SEC61B-201ENST00000223641 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 ZNF814B7Z6K7 855 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 NPIPA2E9PIF3 369 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 NPIPA3F8WFD2 350 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 BCKDKO14874 412 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 CXCL13O43927 109 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 AKR7A3O95154 331 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 HIST1H2ABP04908 130 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 IGFBP1P08833 259 aaPredicted RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 EPHA2P29317 976 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 EIF1AXP47813 144 aaKnown RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 CRISP1P54107 249 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 AQP4P55087 323 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 CDK5Q00535 292 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 SLC36A3Q495N2 470 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 EMC4Q5J8M3 183 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 SMARCD3Q6STE5 483 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 THSD4Q6ZMP0 1018 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 HIST3H2AQ7L7L0 130 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 NANOGNBQ7Z5D8 188 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 HIST1H2ACQ93077 130 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 ZNF845Q96IR2 970 aaPredicted RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 GPX7Q96SL4 187 aaPredicted RBP12.56□□□□□ -0.4
SEC61B-201ENST00000223641 MBOAT4Q96T53 435 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 EGLN3Q9H6Z9 239 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 TIGARQ9NQ88 270 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 ORC6Q9Y5N6 252 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 CACNA1BQ00975 2339 aa12.56□□□□□ -0.4
SEC61B-201ENST00000223641 TTLL8A6PVC2 850 aa12.55□□□□□ -0.4
SEC61B-201ENST00000223641 BLOC1S5-TXNDC5H3BN57 136 aa12.55□□□□□ -0.4
SEC61B-201ENST00000223641 SMAD9O15198 467 aaKnown RBP12.55□□□□□ -0.4
SEC61B-201ENST00000223641 SLC16A6O15403 523 aa12.55□□□□□ -0.4
SEC61B-201ENST00000223641 NDUFB2O95178 105 aa12.55□□□□□ -0.4
SEC61B-201ENST00000223641 VAMP5O95183 116 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms