RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 AADACL4Q5VUY2 407 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 IL20RBQ6UXL0 311 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 LANCL3Q6ZV70 420 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 LINC00471Q8N535 108 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SLC37A3Q8NCC5 494 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 OR13C5Q8NGS8 318 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 OR6K6Q8NGW6 343 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 OR4C6Q8NH72 309 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 TTC9Q92623 222 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PTP4A1Q93096 173 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 ZNF524Q96C55 264 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SMURF1Q9HCE7 757 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 FBXO8Q9NRD0 319 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 NTMQ9P121 344 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 IER3IP1Q9Y5U9 82 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 DAPL1A0PJW8 107 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 FAM221BA6H8Z2 402 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 LMO7DNF2Z398 122 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 BCAT2O15382 392 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 AKR7A2O43488 359 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SRPX2O60687 465 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 WISP1O95388 367 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 THBS1P07996 1170 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 PIPP12273 146 aaPredicted RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 SDHBP21912 280 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 FASLGP48023 281 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 NR0B1P51843 470 aaKnown RBP9.13□□□□□ -0.95
USP11-201ENST00000218348 EFNA3P52797 238 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 GAS1P54826 345 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 ERVK-25P63136 954 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 MFSD13AQ14CX5 517 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PDSS1Q5T2R2 415 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 EEF1A1P5Q5VTE0 462 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 TMEM81Q6P7N7 255 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 APOOLQ6UXV4 268 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 CD300LDQ6UXZ3 194 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 STX12Q86Y82 276 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 LYSMD2Q8IV50 215 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 GPR135Q8IZ08 494 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 OR1L3Q8NH93 324 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 UFD1Q92890 307 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 ORAI1Q96D31 301 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 SLA2Q9H6Q3 261 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 CLDN16Q9Y5I7 305 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
USP11-201ENST00000218348 PIAS2O75928 621 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 F13BP05160 661 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ACAA2P42765 397 aaKnown RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 RAB40BQ12829 278 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ARHGAP40Q5TG30 622 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 NANPQ8TBE9 248 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 POM121Q96HA1 1249 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 FYTTD1Q96QD9 318 aaKnown RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 STACQ99469 402 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 RTN4RQ9BZR6 473 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 CTSFQ9UBX1 484 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 SEC14L4Q9UDX3 406 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 PCDHGB6Q9Y5F9 930 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 CUL9Q8IWT3 2517 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 A0A1W2PQL4 384 aaPredicted RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 TLCD2A6NGC4 264 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 MCIDASD6RGH6 385 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 SLC30A4O14863 429 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 PRAMEF2O60811 474 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 NSA2O95478 260 aaKnown RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 CSF2RBP32927 897 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 GPR3P46089 330 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 CAPZA1P52907 286 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 EFNB1P98172 346 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 MLLT11Q13015 90 aaPredicted RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 FAM131AQ6UXB0 335 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 CLDN22Q8N7P3 220 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ATP6V1C2Q8NEY4 427 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ZNF563Q8TA94 476 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ZPLD1Q8TCW7 415 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ATOH1Q92858 354 aaPredicted RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 RFKQ969G6 155 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 RASD2Q96D21 266 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 DIRAS2Q96HU8 199 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 NMNAT3Q96T66 252 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 GON7Q9BXV9 100 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 NDUFB11Q9NX14 153 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 ZNF223Q9UK11 482 aaPredicted RBP9.12□□□□□ -0.95
USP11-201ENST00000218348 SIGLEC7Q9Y286 467 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 FAM186AA6NE01 2351 aa9.12□□□□□ -0.95
USP11-201ENST00000218348 SHISA3A0PJX4 238 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 BET1O15155 118 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ZNF749O43361 778 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 GMDSO60547 372 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PPM1BO75688 479 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 UPK1BO75841 260 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 FABP1P07148 127 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 HIST1H1CP16403 213 aaKnown RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 UGT2B10P36537 528 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 MAGEB1P43366 347 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 RORCP51449 518 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 OR12D2P58182 307 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms