RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 GAREM2Q75VX8 874 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 AAED1Q7RTV5 226 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SUMF2Q8NBJ7 301 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 FOXN4Q96NZ1 517 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 A0A0D9SG52 128 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ACOD1A6NK06 481 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 UBL3O95164 117 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SNAPINO95295 136 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SERPINA7P05543 415 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 MSL3P1P0C860 447 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 HTR2CP28335 458 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF674Q2M3X9 581 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 RFPL4BQ6ZWI9 263 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 OR13F1Q8NGS4 319 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 WDR76Q9H967 626 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CA5BQ9Y2D0 317 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CEBPZOSA8MTT3 80 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
SF3A1-201ENST00000215793 DDAH2O95865 285 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 FPR3P25089 353 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 MTCP1P56278 107 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 TNK1Q13470 666 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF740Q8NDX6 193 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
SF3A1-201ENST00000215793 NUDT22Q9BRQ3 303 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 OR51B6Q9H340 312 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 OLAHQ9NV23 265 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 PGAP2Q9UHJ9 254 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 PCDHB10Q9UN67 800 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 HTD2P86397 168 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 DPY19L2P2Q6ZN68 376 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SLC46A3Q7Z3Q1 461 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 LACC1Q8IV20 430 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 LILRA2Q8N149 483 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 TM4SF18Q96CE8 201 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 GLIPR2Q9H4G4 154 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 MYH1P12882 1939 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 IL32P24001 234 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 HTR1FP30939 366 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 RBPJQ06330 500 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 MFAP5Q13361 173 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 TANGO2Q6ICL3 276 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 GRAMD2AQ8IUY3 354 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 CMIPQ8IY22 773 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 PLCXD1Q9NUJ7 323 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ASIC5Q9NY37 505 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 USP22Q9UPT9 525 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SOCS7O14512 581 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 EIF1P41567 113 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 AFF3P51826 1226 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 NRARPQ7Z6K4 114 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SDSLQ96GA7 329 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 FCRL1Q96LA6 429 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 QRSL1Q9H0R6 528 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 THAP10Q9P2Z0 257 aaPredicted RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 TMEM184BQ9Y519 407 aaPredicted RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 PCDHGA1Q9Y5H4 931 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 MCRIP1C9JLW8 97 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ACOT8O14734 319 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 CTNSO60931 367 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SNRPBP14678 240 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 RAB6AP20340 208 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ELAVL4P26378 380 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 GPLD1P80108 840 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 GAB1Q13480 694 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 CRMP1Q14194 572 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 DCAF12Q5T6F0 453 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ABHD17CQ6PCB6 329 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 RFLNAQ6ZTI6 216 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 TMEFF1Q8IYR6 380 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 VN1R2Q8NFZ6 395 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 PAQR8Q8TEZ7 354 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 GIMAP1Q8WWP7 306 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 ULBP3Q9BZM4 244 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 SEMA6CQ9H3T2 930 aa12.58□□□□□ -0.4
SF3A1-201ENST00000215793 NGBQ9NPG2 151 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms