RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 MED20Q9H944 212 aa16.51■□□□□ 0.23
PHGDH-209ENST00000641074 NRIP3Q9NQ35 241 aa16.51■□□□□ 0.23
PHGDH-209ENST00000641074 MRPS18AQ9NVS2 196 aaKnown RBP16.51■□□□□ 0.23
PHGDH-209ENST00000641074 RSL24D1Q9UHA3 163 aaKnown RBP16.51■□□□□ 0.23
PHGDH-209ENST00000641074 PTHP01270 115 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 TSPAN19P0C672 248 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 UQCRC1P31930 480 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 MTNR1AP48039 350 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 ITGADQ13349 1161 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 FAM69AQ5T7M9 428 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 JMJD6Q6NYC1 403 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-209ENST00000641074 IGF2-ASQ6U949 168 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 PLCZ1Q86YW0 608 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 BEST3Q8N1M1 668 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 LRRC75AQ8NAA5 344 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 OR52I1Q8NGK6 324 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 POC1BQ8TC44 478 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 PTP4A1Q93096 173 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 KIAA1143Q96AT1 154 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-209ENST00000641074 SLC25A36Q96CQ1 311 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 C1GALT1C1Q96EU7 318 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 MRGPRX4Q96LA9 322 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 H2AFY2Q9P0M6 372 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-209ENST00000641074 FAM186AA6NE01 2351 aa16.5■□□□□ 0.23
PHGDH-209ENST00000641074 DOCK10Q96BY6 2186 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 G3V3Y1 287 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 MT-ATP6P00846 226 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 HIST1H2ABP04908 130 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ADORA3P0DMS8 318 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 LIFP15018 202 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 HIST1H1CP16403 213 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 DCKP27707 260 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 PSMB9P28065 219 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 HTR1FP30939 366 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ERVK-25P63136 954 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 RPL18Q07020 188 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 DBPQ10586 325 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 RAB40BQ12829 278 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 CRMP1Q14194 572 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ANKDD1AQ495B1 522 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 KLHL22Q53GT1 634 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ALG10Q5BKT4 473 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 HIST3H2AQ7L7L0 130 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 NANOGNBQ7Z5D8 188 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 C9orf43Q8TAL5 461 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 FCGR1BQ92637 280 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 HIST1H2ACQ93077 130 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ISOC1Q96CN7 298 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 NMD3Q96D46 503 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 KATNB1Q9BVA0 655 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 NAA50Q9GZZ1 169 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 PTGES2Q9H7Z7 377 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 KLHL1Q9NR64 748 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 WARS2Q9UGM6 360 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 PRR23D1E9PI22 279 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ARPC3O15145 178 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 EFNA2O43921 213 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 APOL3O95236 402 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 IFNGP01579 166 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 PRR23D2P0DMB1 279 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 ZNF3P17036 446 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 IL11P20809 199 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 TCEA1P23193 301 aaKnown RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 FOXK1P85037 733 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 NIPAL3Q6P499 406 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 C5orf46Q6UWT4 87 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 MAMDC2Q7Z304 686 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-209ENST00000641074 CYB561A3Q8NBI2 242 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 SLC37A3Q8NCC5 494 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 OR52E2Q8NGJ4 325 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 OR4K13Q8NH42 304 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 WDR70Q9NW82 654 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 STMN3Q9NZ72 180 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 SEC14L4Q9UDX3 406 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 CLEC2DQ9UHP7 191 aa16.49■□□□□ 0.23
PHGDH-209ENST00000641074 SLC30A4O14863 429 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 SNPHO15079 494 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 ZNF208O43345 1280 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 AHSA1O95433 338 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 F13BP05160 661 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 AIMP2Q13155 320 aaKnown RBP16.48■□□□□ 0.23
PHGDH-209ENST00000641074 MEPCEQ7L2J0 689 aaKnown RBP16.48■□□□□ 0.23
PHGDH-209ENST00000641074 ZNF227Q86WZ6 799 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 GID4Q8IVV7 300 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 ATP6V1C2Q8NEY4 427 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 OR5M1Q8NGP8 315 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 CRELD1Q96HD1 420 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 ARL5BQ96KC2 179 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 GNRHR2Q96P88 292 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 YIPF3Q9GZM5 350 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 FGF20Q9NP95 211 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-209ENST00000641074 TAS2R5Q9NYW4 299 aa16.48■□□□□ 0.23
PHGDH-209ENST00000641074 DIMT1Q9UNQ2 313 aaKnown RBP16.48■□□□□ 0.23
PHGDH-209ENST00000641074 IRGMA1A4Y4 181 aa16.47■□□□□ 0.23
PHGDH-209ENST00000641074 FAM47E-STBD1D6RA91 191 aa16.47■□□□□ 0.23
PHGDH-209ENST00000641074 IDH3BO43837 385 aa16.47■□□□□ 0.23
PHGDH-209ENST00000641074 OR2T1O43869 369 aa16.47■□□□□ 0.23
PHGDH-209ENST00000641074 DXOO77932 396 aaKnown RBP16.47■□□□□ 0.23
PHGDH-209ENST00000641074 SNX4O95219 450 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms