RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 TNFRSF10DQ9UBN6 386 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 MAST2Q6P0Q8 1798 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 VIRMAQ69YN4 1812 aaKnown RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ATAD5Q96QE3 1844 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 HNRNPH3P31942 346 aaKnown RBP4.65□□□□□ -1.67
SCN1A-218ENST00000640036 BIDP55957 195 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PRSS36Q5K4E3 855 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 PERM1Q5SV97 790 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GPR139Q6DWJ6 353 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 OR52N5Q8NH56 324 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 ZFP90Q8TF47 636 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 CNTNAP3BQ96NU0 1288 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 LMF1Q96S06 567 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 GPR22Q99680 433 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM246Q9BRR3 403 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 LYRM4Q9HD34 91 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 B3GNT2Q9NY97 397 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 TP53TG5Q9Y2B4 290 aa4.65□□□□□ -1.67
SCN1A-218ENST00000640036 NPIPA5A0A0B4J1W7 369 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 E7ESA3 106 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SUSD5O60279 629 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PF4V1P10720 104 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SLC2A5P22732 501 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PBX1P40424 430 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MLLT10P55197 1068 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 POU3F1Q03052 451 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 LRRC18Q8N456 261 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 BAHD1Q8TBE0 780 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF480Q8WV37 535 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TCTEX1D2Q8WW35 142 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TSSK6Q9BXA6 273 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MS4A5Q9H3V2 200 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 POMT2Q9UKY4 750 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MSRB2Q9Y3D2 182 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 A0A0B4J203 849 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 A0A1W2PPM1 405 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GFYI3L273 518 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GNRHRP30968 328 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 BRS3P32247 399 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TRIM23P36406 574 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MTNR1AP48039 350 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RPS18P62269 152 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SH3BP2P78314 561 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MC2RQ01718 297 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SPATS1Q496A3 300 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAM205BPQ63HN1 556 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 REC114Q7Z4M0 266 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SULF2Q8IWU5 870 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GCNT2Q8N0V5 402 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RNF128Q8TEB7 428 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ADAMTS14Q8WXS8 1223 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TTC9Q92623 222 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NEIL2Q969S2 332 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RRNAD1Q96FB5 475 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GNB4Q9HAV0 340 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 IL21Q9HBE4 155 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CPNE5Q9HCH3 593 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MEPEQ9NQ76 525 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TAS2R1Q9NYW7 299 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MGAT4CQ9UBM8 478 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 KIF25Q9UIL4 384 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 KLHL21Q9UJP4 597 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GNG8Q9UK08 70 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 AJAP1Q9UKB5 411 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NFS1Q9Y697 457 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 H7C417 338 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CREBL2O60519 120 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 EDF1O60869 148 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF780AO75290 641 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 UTS2O95399 124 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ACTL6AO96019 429 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 HOXC4P09017 264 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 METTL15P1P0C7V9 234 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ACVR1BP36896 505 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CLDN15P56746 228 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 EMX2Q04743 252 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SELENBP1Q13228 472 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 EXOSC7Q15024 291 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF684Q5T5D7 378 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 METTL2BQ6P1Q9 378 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAHD2BQ6P2I3 314 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 B3GLCTQ6Y288 498 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 C3orf56Q8N813 242 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 LRTOMTQ8WZ04 291 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DNASE2BQ8WZ79 361 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PSMF1Q92530 271 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAHD2AQ96GK7 314 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TUBA1CQ9BQE3 449 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RANBP3Q9H6Z4 567 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MOB1AQ9H8S9 216 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZFP64Q9NPA5 681 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DMRT3Q9NQL9 472 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NUDT15Q9NV35 164 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM181Q9P2C4 612 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ACTL7AQ9Y615 435 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TRAPPC13A5PLN9 417 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ANHXE9PGG2 379 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CXCR6O00574 342 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 KLF11O14901 512 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OLFM2O95897 454 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms