RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MYNNQ9NPC7 610 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 THUMPD1Q9NXG2 353 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 BAG5Q9UL15 447 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EML6Q6ZMW3 1958 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CPAMD8Q8IZJ3 1885 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 A0A0G2JNJ9 132 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 WBP4O75554 376 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TRAPPC6AO75865 159 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 DIRAS1O95057 198 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CPSF4O95639 269 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 P04436 131 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FMO3P31513 532 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 LTBQ06643 244 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF763Q0D2J5 394 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FAM71E1Q6IPT2 247 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ARSKQ6UWY0 536 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CCDC80Q76M96 950 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 COMMD6Q7Z4G1 85 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 GLB1L2Q8IW92 636 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM251Q8N6I4 163 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF321PQ8N8H1 164 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ANKRD53Q8N9V6 530 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZFP62Q8NB50 900 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 POGLUT1Q8NBL1 392 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 WFDC11Q8NEX6 87 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TRUB1Q8WWH5 349 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 REPS1Q96D71 796 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 VMP1Q96GC9 406 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 APOL4Q9BPW4 351 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PSD2Q9BQI7 771 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TTYH2Q9BSA4 534 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 DOHHQ9BU89 302 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EFCAB11Q9BUY7 163 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 REEP4Q9H6H4 257 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TBC1D23Q9NUY8 699 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PDP1Q9P0J1 537 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ERVK-18Q9QC07 812 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 Q9UFV3 132 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 KCNN3Q9UGI6 736 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 YARS2Q9Y2Z4 477 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SAMHD1Q9Y3Z3 626 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SNX5Q9Y5X3 404 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 C4orf51C9J302 202 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MAGEB3O15480 346 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CTAG2O75638 210 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MT-ND2P03891 347 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 HOXD4P09016 255 aaPredicted RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CYP4B1P13584 511 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF12P17014 697 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TCEA1P23193 301 aaKnown RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CERS1P27544 350 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TGFBR2P37173 567 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM64Q6YI46 380 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 QSOX2Q6ZRP7 698 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 METTL4Q8N3J2 472 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SLC15A4Q8N697 577 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 C11orf65Q8NCR3 313 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 LINC01560Q8TB33 94 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TM4SF19Q96DZ7 209 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RASL10BQ96S79 203 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RHNO1Q9BSD3 238 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 DGCR6LQ9BY27 220 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ALOXE3Q9BYJ1 711 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SLC6A15Q9H2J7 730 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM38AQ9H6F2 299 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 REEP1Q9H902 201 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CCNB1IP1Q9NPC3 277 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 AKIP1Q9NQ31 210 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 KRT84Q9NSB2 600 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 FKBP14Q9NWM8 211 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ST6GALNAC2Q9UJ37 374 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TPRKBQ9Y3C4 175 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 GMPPBQ9Y5P6 360 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 LYVE1Q9Y5Y7 322 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MXRA5Q9NR99 2828 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TRBC2A0A5B9 178 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ANKDD1BA6NHY2 528 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MYO1GB0I1T2 1018 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SAP18O00422 153 aaKnown RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RTCAO00442 366 aaKnown RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SLC22A1O15245 554 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SULT1C4O75897 302 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MT-ND5P03915 603 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 C1GALT1C1LP0DN25 315 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CCL3P10147 92 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TRHRP34981 398 aaPredicted RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 LIMS1P48059 325 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SELENOWP63302 87 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms