RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 BHLHA15Q7RTS1 189 aaPredicted RBP12.56□□□□□ -0.4
PNKP-223ENST00000629179 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 POU5F2Q8N7G0 328 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 LSMEM1Q8N8F7 131 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 GPR32P1Q8NGA4 272 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 NINJ1Q92982 152 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 APH1AQ96BI3 265 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 SLC25A36Q96CQ1 311 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 KTI12Q96EK9 354 aaPredicted RBP12.56□□□□□ -0.4
PNKP-223ENST00000629179 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 EDARQ9UNE0 448 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 USP22Q9UPT9 525 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
PNKP-223ENST00000629179 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.55□□□□□ -0.4
PNKP-223ENST00000629179 AQP7P3A6NL99 342 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 M0R3H8 397 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 ATE1O95260 518 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 AHSA1O95433 338 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 LGI1O95970 557 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 NPPAP01160 153 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 RAF1P04049 648 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 P2RY4P51582 365 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 SEC24CP53992 1094 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 NCALDP61601 193 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 KEAP1Q14145 624 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 TAB1Q15750 504 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 VMACQ2NL98 169 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 BEX5Q5H9J7 111 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 ALG10BQ5I7T1 473 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 TMEM225Q6GV28 225 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 C6orf89Q6UWU4 347 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 CASP12Q6UXS9 341 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 PATL1Q86TB9 770 aaKnown RBP12.55□□□□□ -0.4
PNKP-223ENST00000629179 CALHM3Q86XJ0 350 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 P3H2Q8IVL5 708 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 MFSD8Q8NHS3 518 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 RNF217Q8TC41 542 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
PNKP-223ENST00000629179 TAMM41Q96BW9 452 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 RCN3Q96D15 328 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 SH3GL1Q99961 368 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
PNKP-223ENST00000629179 PTDSS2Q9BVG9 487 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
PNKP-223ENST00000629179 TESQ9UGI8 421 aaKnown RBP12.55□□□□□ -0.4
PNKP-223ENST00000629179 AKAP9Q99996 3911 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 IGKV1D-42A0A075B6H8 117 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SLC22A2O15244 555 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 PLAUP00749 431 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 CD247P20963 164 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 FOXG1P55316 489 aaPredicted RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 NRF1Q16656 503 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 INTS11Q5TA45 600 aaKnown RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 ULK3Q6PHR2 472 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 GPAT4Q86UL3 456 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 OR4D11Q8NGI4 311 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SLC26A7Q8TE54 656 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 HSD17B8Q92506 261 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SLC38A4Q969I6 547 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 TAAR8Q969N4 342 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SLC47A1Q96FL8 570 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 PLPPR2Q96GM1 343 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 ZNF583Q96ND8 569 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 ZNF385AQ96PM9 386 aaKnown RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 MCHR1Q99705 422 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SF3B5Q9BWJ5 86 aaKnown RBP12.54□□□□□ -0.4
PNKP-223ENST00000629179 PARPBPQ9NWS1 579 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 GID8Q9NWU2 228 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 SLC9A8Q9Y2E8 581 aa12.54□□□□□ -0.4
PNKP-223ENST00000629179 A0A087WUJ7 227 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 A0A0B4J2E0 115 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 A0A1B0GX12 115 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 CCDC22O60826 627 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 C8BP07358 591 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 PNMTP11086 282 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 COX4I1P13073 169 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 CD53P19397 219 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 COX5AP20674 150 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 PTNP21246 168 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 CRYBA2P53672 197 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 GYS2P54840 703 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 CDH12P55289 794 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 FAPQ12884 760 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 NPTX1Q15818 432 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 STK11Q15831 433 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
PNKP-223ENST00000629179 CCDC80Q76M96 950 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms