RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GSNP06396 782 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 DBIP07108 87 aaKnown RBP16.55■□□□□ 0.24
SMN1-211ENST00000625245 IGFBP5P24593 272 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 SLC1A6P48664 564 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 MAP2K6P52564 334 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 IQCCQ4KMZ1 466 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 TMEM225Q6GV28 225 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 SLC46A3Q7Z3Q1 461 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 SPATA19Q7Z5L4 167 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 ABHD12BQ7Z5M8 362 aaPredicted RBP16.55■□□□□ 0.24
SMN1-211ENST00000625245 CADM2Q8N3J6 435 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 TRIML2Q8N7C3 387 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 ANKS4BQ8N8V4 417 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 FOXN4Q96NZ1 517 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 SF3B5Q9BWJ5 86 aaKnown RBP16.55■□□□□ 0.24
SMN1-211ENST00000625245 C20orf27Q9GZN8 174 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 ADAM19Q9H013 955 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 TMEM45AQ9NWC5 275 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 ADPRHL2Q9NX46 363 aa16.55■□□□□ 0.24
SMN1-211ENST00000625245 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.55■□□□□ 0.24
SMN1-211ENST00000625245 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 SLC35F4A4IF30 521 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 AQP7P3A6NL99 342 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 VWC2LB2RUY7 222 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 FAAHO00519 579 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 LGI1O95970 557 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 GKN3PP0CG01 181 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 APEHP13798 732 aaKnown RBP16.54■□□□□ 0.24
SMN1-211ENST00000625245 SERPINF1P36955 418 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 CDKN2CP42773 168 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 NR4A2P43354 598 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 UFM1P61960 85 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 VSNL1P62760 191 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 LGALS3BPQ08380 585 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 BNIP2Q12982 314 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 TBRG1Q3YBR2 411 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 COX20Q5RI15 118 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 C1QTNF12Q5T7M4 302 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 VHLLQ6RSH7 139 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 PEX5LQ8IYB4 626 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 TEX37Q96LM6 180 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 SLC38A2Q96QD8 506 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 OR52E6Q96RD3 313 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 SORT1Q99523 831 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 C19orf24Q9BVV8 132 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 RLIMQ9NVW2 624 aa16.54■□□□□ 0.24
SMN1-211ENST00000625245 ZNF587BE7ETH6 402 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 NDUFS8O00217 210 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 BIRC5O15392 142 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 RPS4Y1P22090 263 aaKnown RBP16.53■□□□□ 0.24
SMN1-211ENST00000625245 UBE2NP61088 152 aaKnown RBP16.53■□□□□ 0.24
SMN1-211ENST00000625245 GSTA3Q16772 222 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 FAM120AOSQ5T036 256 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 ZNF440Q8IYI8 595 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 OR1K1Q8NGR3 316 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 MSI2Q96DH6 328 aaKnown RBP16.53■□□□□ 0.24
SMN1-211ENST00000625245 PRR14Q9BWN1 585 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 OBP2BQ9NPH6 170 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 PNPOQ9NVS9 261 aa16.53■□□□□ 0.24
SMN1-211ENST00000625245 IGHV4-61A0A0C4DH41 118 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 LOC390937A0A1W2PQ73 354 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 NR5A2O00482 541 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 CRYAAP02489 173 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 BGNP21810 368 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 SELENOPP49908 381 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 COPZ1P61923 177 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 TUBA1BP68363 451 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 TUBA4AP68366 448 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 TXNL4AP83876 142 aaKnown RBP16.52■□□□□ 0.24
SMN1-211ENST00000625245 TUBA1AQ71U36 451 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 VRK2Q86Y07 508 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 OR52P1PQ8NH57 321 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 CA10Q9NS85 328 aa16.52■□□□□ 0.24
SMN1-211ENST00000625245 A0A096LPE4 126 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 A0A1W2PPZ6 126 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 B9A039 149 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 HAX1O00165 279 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 TGFAP01135 160 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 PGRP06401 933 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 ALDOCP09972 364 aaKnown RBP16.51■□□□□ 0.23
SMN1-211ENST00000625245 OR4A8P0C604 315 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 HNF1AP20823 631 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 IL12AP29459 219 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 THBS2P35442 1172 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 STX3Q13277 289 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 KRT71Q3SY84 523 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 WBP2NLQ6ICG8 309 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 NIPAL3Q6P499 406 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 ZNF836Q6ZNA1 936 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 CREB3L2Q70SY1 520 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 ALKBH3Q96Q83 286 aaPredicted RBP16.51■□□□□ 0.23
SMN1-211ENST00000625245 ZBTB18Q99592 522 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 KATNB1Q9BVA0 655 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 PIF1Q9H611 641 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 MEAF6Q9HAF1 191 aa16.51■□□□□ 0.23
SMN1-211ENST00000625245 CDHR4A6H8M9 788 aa16.5■□□□□ 0.23
SMN1-211ENST00000625245 A8MVM7 634 aa16.5■□□□□ 0.23
SMN1-211ENST00000625245 RGS16O15492 202 aaPredicted RBP16.5■□□□□ 0.23
SMN1-211ENST00000625245 SNUPNO95149 360 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms