RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NMNAT3Q96T66 252 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LRRN3Q9H3W5 708 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 MARCH7Q9H992 704 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 UBQLN4Q9NRR5 601 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LANCL2Q9NS86 450 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 C2orf42Q9NWW7 574 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 NCDNQ9UBB6 729 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 SYNDIG1LA6NDD5 238 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 TLCD2A6NGC4 264 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 GNB5O14775 395 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 GPRIN2O60269 458 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 TMEM127O75204 238 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 ZNF217O75362 1048 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 AHCYP23526 432 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 CD1CP29017 333 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 BTCP35070 178 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 BTG1P62324 171 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 ZNF74Q16587 644 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 GKN2Q86XP6 184 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 EXD3Q8N9H8 876 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 ZNF527Q8NB42 609 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 UBASH3BQ8TF42 649 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 DMRTB1Q96MA1 342 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 CMTM3Q96MX0 182 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 WDR70Q9NW82 654 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 COPS3Q9UNS2 423 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 IGKV3D-11A0A0A0MRZ8 115 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 IGHV5-51A0A0C4DH38 117 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 A0A1W2PRG6 482 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 IMPA2O14732 288 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 GLCEO94923 617 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 TXNDC12O95881 172 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 PAHP00439 452 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 ASAH2BP0C7U1 165 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 ARSBP15848 533 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 ATF1P18846 271 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 TCEA1P23193 301 aaKnown RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 CD27P26842 260 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 MST1P26927 711 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 RPL4P36578 427 aaKnown RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 PPICP45877 212 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 INPP1P49441 399 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 MMP15P51511 669 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 CD226Q15762 336 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 GPR135Q8IZ08 494 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC7A5P1Q8MH63 180 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 ZPLD1Q8TCW7 415 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 MRPL48Q96GC5 212 aaKnown RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 LMF1Q96S06 567 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC38A3Q99624 504 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC2A4RGQ9NR83 387 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 ACOXLQ9NUZ1 547 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 EPHA6Q9UF33 1036 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC6A5Q9Y345 797 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 MMACHCQ9Y4U1 282 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 CLCA3PQ9Y6N3 262 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 A0A0C4DFX4 3053 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SPTBP11277 2137 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 C17orf105B2RV13 164 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 FLRT2O43155 660 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 UBL3O95164 117 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 IGKV3-11P04433 115 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 UBL4AP11441 157 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 S100A1P23297 94 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 UQCRC1P31930 480 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 NAA10P41227 235 aaPredicted RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 MRPS15P82914 257 aaKnown RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC36A2Q495M3 483 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 ZNF57Q68EA5 555 aaPredicted RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 ASCC1Q8N9N2 400 aaKnown RBP8.61□□□□□ -1.03
PDPN-212ENST00000621990 OR51L1Q8NGJ5 315 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SNX33Q8WV41 574 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 SLC46A1Q96NT5 459 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 HDHD2Q9H0R4 259 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 NIPAL2Q9H841 368 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 PDE7BQ9NP56 450 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 MTCH2Q9Y6C9 303 aa8.61□□□□□ -1.03
PDPN-212ENST00000621990 TRBV2A0A0J9YWF9 115 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 FRG2CA6NGY1 282 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 ELOA3DA6NLF2 546 aaPredicted RBP8.6□□□□□ -1.03
PDPN-212ENST00000621990 CTDSPLO15194 276 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 MAGEB4O15481 346 aaPredicted RBP8.6□□□□□ -1.03
PDPN-212ENST00000621990 OIP5O43482 229 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 SCO2O43819 266 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 SELENOFO60613 162 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 IFNA16P05015 189 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 LCN1P31025 176 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 GFERP55789 205 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 RRAS2P62070 204 aaPredicted RBP8.6□□□□□ -1.03
PDPN-212ENST00000621990 ERVK-25P63136 954 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 CD83Q01151 205 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 EGR4Q05215 589 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 GRM7Q14831 915 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 ELOA3BQ3SY89 546 aa8.6□□□□□ -1.03
PDPN-212ENST00000621990 YIF1BQ5BJH7 314 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms