RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 A0A1W2PPK0 400 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 FAM166BA8MTA8 275 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 KIAA1324LA8MWY0 1029 aaPredicted RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 FOXO6A8MYZ6 492 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 ADH4P08319 380 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 DHRS4L1P0CG22 281 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 GLB1P16278 677 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 C5AR1P21730 350 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 CXCL12P48061 93 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 SLC25A11Q02978 314 aaKnown RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 CAMK2BQ13554 666 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 OTUD1Q5VV17 481 aaPredicted RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 NETO2Q8NC67 525 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 GPR26Q8NDV2 337 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 NLGN4YQ8NFZ3 816 aaPredicted RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 DCLRE1CQ96SD1 692 aaKnown RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 EGLN3Q9H6Z9 239 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 EIF4EP06730 217 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 DCTP40126 519 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PREPP48147 710 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TRA2BP62995 288 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CEBPEQ15744 281 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 Q3ZCU0 254 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PLK5Q496M5 336 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 WDR74Q6RFH5 385 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 DCAF4L2Q8NA75 395 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ZNRF4Q8WWF5 429 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 LRFN5Q96NI6 719 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 HCAR1Q9BXC0 346 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 GPR34Q9UPC5 381 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ANKUB1A6NFN9 424 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 FOXE1O00358 373 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ADAM11O75078 769 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ADAMTS4O75173 837 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 FBXO24O75426 580 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 RPL7P18124 248 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TACR3P29371 465 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ARG2P78540 354 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PIGFQ07326 219 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PPP1R8Q12972 351 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SERTAD2Q14140 314 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MRPL21Q7Z2W9 205 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MKXQ8IYA7 352 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 RNF113BQ8IZP6 322 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SLC5A8Q8N695 610 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 OR8U1Q8NH10 309 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 KCNE4Q8WWG9 221 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SIGLEC10Q96LC7 697 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PELI2Q9HAT8 420 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 C1GALT1Q9NS00 363 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MOKQ9UQ07 419 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CFAP20Q9Y6A4 193 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 HEPACAM2A8MVW5 462 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CD63P08962 238 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CT45A10P0DMU9 189 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CBR1P16152 277 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 APLNRP35414 380 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PXNP49023 591 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TAS2R45P59539 299 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TIGITQ495A1 244 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TMUB2Q71RG4 321 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 RBMXL3Q8N7X1 1067 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CLEC4DQ8WXI8 215 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 APH1AQ96BI3 265 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CMTM3Q96MX0 182 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 LYSMD1Q96S90 227 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF160Q9HCG1 818 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 IL37Q9NZH6 218 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF337Q9Y3M9 751 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 LGALS8O00214 317 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CHEK1O14757 476 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SLC16A6O15403 523 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PDGFBP01127 241 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ALDOAP04075 364 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SCG5P05408 212 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CSF3P09919 207 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CTRB1P17538 263 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SSTR2P30874 369 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SUB1P53999 127 aaKnown RBP eCLIP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 GPLD1P80108 840 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CTRB2Q6GPI1 263 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 OGFOD3Q6PK18 319 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 NRMQ8IXM6 262 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 CCDC116Q8IYX3 515 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 PGBD5Q8N414 524 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TCTEX1D1Q8N7M0 179 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 BPIFCQ8NFQ6 507 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 AKR7LQ8NHP1 331 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 KCNG3Q8TAE7 436 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 TANKQ92844 425 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MMABQ96EY8 250 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SDR39U1Q9NRG7 319 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 SLC2A8Q9NY64 477 aa6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MAFBQ9Y5Q3 323 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms