RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZNF350Q9GZX5 532 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CST11Q9H112 138 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TTYH1Q9H313 450 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 NUDT15Q9NV35 164 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 POLHQ9Y253 713 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CHST2Q9Y4C5 530 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 MGAMO43451 1857 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TMED7-TICAM2A0A0A6YYA0 188 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT5O00445 386 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF208O43345 1280 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 APEHP13798 732 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 APEX1P27695 318 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CASP3P42574 277 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 DAP3P51398 398 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF84P51523 738 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR10A3P58181 314 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 RACK1P63244 317 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CAMK2DQ13557 499 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OCLNQ16625 522 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 POGLUT1Q8NBL1 392 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR4D11Q8NGI4 311 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 C8orf44Q96CB5 159 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TMED7Q9Y3B3 224 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM14AQ9Y6G1 99 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CDH23Q9H251 3354 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 MEN1O00255 615 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TNFRSF10CO14798 259 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 FZD7O75084 574 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SOD1P00441 154 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 POLR2HP52434 150 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 NLRP8Q86W28 1048 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PPP1R3BQ86XI6 285 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ACBD4Q8NC06 268 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR5T2Q8NGG2 359 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 LGALS14Q8TCE9 139 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ELP5Q8TE02 316 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF566Q969W8 418 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 BMFQ96LC9 184 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CFHR5Q9BXR6 569 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PPIL3Q9H2H8 161 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 B3GNT3Q9Y2A9 372 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC6A5Q9Y345 797 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 KANTRA0A1W2PQU2 76 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 HTR2BP41595 481 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 E2F1Q01094 437 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 EFR3AQ14156 821 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ASCC1Q8N9N2 400 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 C19orf43Q9BQ61 176 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 MCCC2Q9HCC0 563 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CPNE5Q9HCH3 593 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 HINT3Q9NQE9 182 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC39A1Q9NY26 324 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ITGB1BP2Q9UKP3 347 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 MGAT4AQ9UM21 535 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 MYO9BQ13459 2157 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 M0R082 166 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ARPC1BO15143 372 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CHP2O43745 196 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PRSS23O95084 383 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SYPP08247 313 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 S100A1P23297 94 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PEBP1P30086 187 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SFXN4Q6P4A7 337 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PRSS45Q7RTY3 260 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CHPT1Q8WUD6 406 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 MICU1Q9BPX6 476 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 OR2B2Q9GZK3 357 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 C11orf54Q9H0W9 315 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SIRT3Q9NTG7 399 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ALG5Q9Y673 324 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CROCCQ5TZA2 2017 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 WDR81Q562E7 1941 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ANKRD61A6NGH8 418 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SULT2B1O00204 365 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 LRRTM2O43300 516 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ADAM23O75077 832 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF620Q6ZNG0 422 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 GDPGP1Q6ZNW5 385 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 UBE3DQ7Z6J8 389 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF486Q96H40 463 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 FGF21Q9NSA1 209 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CXorf51AA0A1B0GTR3 108 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 A0A1W2PPV9 198 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 L7N2F9 121 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 POU3F4P49335 361 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PRKXP51817 358 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 DUSP8Q13202 625 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CTF1Q16619 201 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM53Q6P2H8 277 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SIRT6Q8N6T7 355 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF615Q8N8J6 731 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 C16orf52Q8NHV5 167 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PDCD1LG2Q9BQ51 273 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PHF7Q9BWX1 381 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms