RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 RPS5P46782 204 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 H3F3AP84243 136 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 BNIP2Q12982 314 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 FAM69AQ5T7M9 428 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 REP15Q6BDI9 236 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 AAED1Q7RTV5 226 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 SNX32Q86XE0 403 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 POMGNT2Q8NAT1 580 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 RP9Q8TA86 221 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 MBD6Q96DN6 1003 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 PLPPR2Q96GM1 343 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ASPNQ9BXN1 380 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 TAS2R16Q9NYV7 291 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 PRSS50Q9UI38 385 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 BAG5Q9UL15 447 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 TEX15Q9BXT5 2789 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ABCA12Q86UK0 2595 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 A0A1B0GWA3 101 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 M0QX08 132 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 AIM2O14862 343 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ARHGEF9O43307 516 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 FMO6PO60774 539 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 MFN2O95140 757 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 NQO1P15559 274 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF43P17038 809 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 CD247P20963 164 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 HOXC5Q00444 222 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 FAPQ12884 760 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 C1DQ13901 141 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 SLC17A1Q14916 467 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 PPA1Q15181 289 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 VMACQ2NL98 169 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 C1QTNF12Q5T7M4 302 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 NANOGP8Q6NSW7 305 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 KLHL17Q6TDP4 642 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 C6orf89Q6UWU4 347 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 SPNS3Q6ZMD2 512 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 CPLX4Q7Z7G2 160 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 DEPDC4Q8N2C3 294 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 C10orf53Q8N6V4 93 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 TMEM99Q8N816 258 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 SMYD1Q8NB12 490 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 OR9K2Q8NGE7 335 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 MCHR1Q99705 422 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 CCL19Q99731 98 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 PLEKHF2Q9H8W4 249 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 NANOGQ9H9S0 305 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 MAGED1Q9Y5V3 778 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 FLVCR1Q9Y5Y0 555 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 TRAV36DV7A0A075B6V5 113 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 TMEM229AB2RXF0 380 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF814B7Z6K7 855 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 SMPD2O60906 423 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 RAD51DO75771 328 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 IGHV3-9P01782 118 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 PAX7P23759 505 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 VEZF1Q14119 521 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 OR1Q1Q15612 314 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ADRM1Q16186 407 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ACKR1Q16570 336 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF613Q6PF04 617 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF704Q6ZNC4 412 aaPredicted RBP10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.91□□□□□ -0.66
CBWD3-208ENST00000612050 SPATA21Q7Z572 469 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 PTOV1Q86YD1 416 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 P3H2Q8IVL5 708 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 LZICQ8WZA0 190 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 TMEM45BQ96B21 275 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 SLCO5A1Q9H2Y9 848 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 EFCAB1Q9HAE3 211 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ING1Q9UK53 422 aaPredicted RBP10.91□□□□□ -0.66
CBWD3-208ENST00000612050 B3GALT5Q9Y2C3 310 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 CHST2Q9Y4C5 530 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 RNF115Q9Y4L5 304 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 CORINQ9Y5Q5 1042 aa10.91□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF587BE7ETH6 402 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 FBP2O00757 339 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 CLOCKO15516 846 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 TPST1O60507 370 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 OR6A2O95222 327 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 ATE1O95260 518 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 LGI1O95970 557 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 WNT11O96014 354 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 OPN1SWP03999 348 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 KLK2P20151 261 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 COX5AP20674 150 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 PCBP3P57721 371 aaKnown RBP10.9□□□□□ -0.66
CBWD3-208ENST00000612050 DMTNQ08495 405 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 SELPLGQ14242 412 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 TSC22D1Q15714 1073 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 TAB1Q15750 504 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms