RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 BIRC5O15392 142 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 GKN3PP0CG01 181 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 RPS4Y1P22090 263 aaKnown RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 GZMKP49863 264 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 SNRPD2P62316 118 aaKnown RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 SWI5Q1ZZU3 235 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 MST1LQ2TV78 715 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 COX20Q5RI15 118 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 C1QTNF12Q5T7M4 302 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 IL17RELQ6ZVW7 336 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 ABHD12BQ7Z5M8 362 aaPredicted RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 TRIM44Q96DX7 344 aaPredicted RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 VRK1Q99986 396 aaPredicted RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 SF3B5Q9BWJ5 86 aaKnown RBP21.28■■□□□ 1
CDKN3-211ENST00000611205 ADAM19Q9H013 955 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 RLIMQ9NVW2 624 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 ADPRHL2Q9NX46 363 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 KCNS2Q9ULS6 477 aa21.28■■□□□ 1
CDKN3-211ENST00000611205 AQP7P3A6NL99 342 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 ALDOCP09972 364 aaKnown RBP21.27■■□□□ 1
CDKN3-211ENST00000611205 BGNP21810 368 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 IGFBP5P24593 272 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 TXNL4AP83876 142 aaKnown RBP21.27■■□□□ 1
CDKN3-211ENST00000611205 BNIP2Q12982 314 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 GSTA3Q16772 222 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 KRTAP24-1Q3LI83 254 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 KRT71Q3SY84 523 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 TMEM225Q6GV28 225 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 PEX5LQ8IYB4 626 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 ZNF440Q8IYI8 595 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 LRRC34Q8IZ02 419 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 CADM2Q8N3J6 435 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 AENQ8WTP8 325 aaKnown RBP21.27■■□□□ 1
CDKN3-211ENST00000611205 OR52E6Q96RD3 313 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 TAPBPLQ9BX59 468 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 MEAF6Q9HAF1 191 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 PNPOQ9NVS9 261 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 TMEM45AQ9NWC5 275 aa21.27■■□□□ 1
CDKN3-211ENST00000611205 IGHV1-18A0A0C4DH31 117 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 VWC2LB2RUY7 222 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 SNUPNO95149 360 aaKnown RBP21.26■□□□□ 0.99
CDKN3-211ENST00000611205 LGI1O95970 557 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 PGRP06401 933 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 SRD5A1P18405 259 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 IL12AP29459 219 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 LGALS3BPQ08380 585 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 TBRG1Q3YBR2 411 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 FAM166AQ6J272 317 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 SLC46A3Q7Z3Q1 461 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 VRK2Q86Y07 508 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 KIRREL3Q8IZU9 778 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 ANKS4BQ8N8V4 417 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 OR1K1Q8NGR3 316 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 SLC38A2Q96QD8 506 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 OBP2BQ9NPH6 170 aa21.26■□□□□ 0.99
CDKN3-211ENST00000611205 LOC100289279A0A1B0GTE1 492 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 ZNF587BE7ETH6 402 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 NDUFS8O00217 210 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 RGS16O15492 202 aaPredicted RBP21.25■□□□□ 0.99
CDKN3-211ENST00000611205 APEHP13798 732 aaKnown RBP21.25■□□□□ 0.99
CDKN3-211ENST00000611205 NR4A2P43354 598 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 SELENOPP49908 381 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 UBE2NP61088 152 aaKnown RBP21.25■□□□□ 0.99
CDKN3-211ENST00000611205 COPZ1P61923 177 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 OGFOD2Q6N063 350 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.25■□□□□ 0.994e-9■■■■■ 29.4
CDKN3-211ENST00000611205 ZNF836Q6ZNA1 936 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 SPATA19Q7Z5L4 167 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 ALKBH3Q96Q83 286 aaPredicted RBP21.25■□□□□ 0.99
CDKN3-211ENST00000611205 TMEM109Q9BVC6 243 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 AIG1Q9NVV5 245 aa21.25■□□□□ 0.99
CDKN3-211ENST00000611205 SLC35F4A4IF30 521 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 CDHR4A6H8M9 788 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 TM9SF1O15321 606 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 CRYAAP02489 173 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 SERPINF1P36955 418 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 SRSF2Q01130 221 aaKnown RBP21.24■□□□□ 0.99
CDKN3-211ENST00000611205 STX3Q13277 289 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 IQCCQ4KMZ1 466 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 LIN52Q52LA3 116 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 WBP2NLQ6ICG8 309 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 NIPAL3Q6P499 406 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 VHLLQ6RSH7 139 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 OR52P1PQ8NH57 321 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 FOXN4Q96NZ1 517 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 ZBTB18Q99592 522 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 PRR14Q9BWN1 585 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 PIF1Q9H611 641 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 CA10Q9NS85 328 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 P2RX2Q9UBL9 471 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 HAO1Q9UJM8 370 aa21.24■□□□□ 0.99
CDKN3-211ENST00000611205 A8MVM7 634 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 NR5A2O00482 541 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 FRS3O43559 492 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 KRT75O95678 551 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 ACAA2P42765 397 aaKnown RBP21.23■□□□□ 0.99
CDKN3-211ENST00000611205 TUBA1BP68363 451 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 TUBA4AP68366 448 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 LRRC74AQ0VAA2 488 aa21.23■□□□□ 0.99
CDKN3-211ENST00000611205 FAM120AOSQ5T036 256 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms