RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ADAM5Q6NVV9 412 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 KLHL24Q6TFL4 600 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 TMEM108Q6UXF1 575 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 ABHD12BQ7Z5M8 362 aaPredicted RBP16.95■□□□□ 0.3
CTSA-217ENST00000607482 YTHDF3Q7Z739 585 aaKnown RBP16.95■□□□□ 0.3
CTSA-217ENST00000607482 MSRB3Q8IXL7 192 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 C11orf65Q8NCR3 313 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 HIPK4Q8NE63 616 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 STK35Q8TDR2 534 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 C3orf49Q96BT1 292 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 ALG2Q9H553 416 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 TMEM38AQ9H6F2 299 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 TMEM27Q9HBJ8 222 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 FAIMQ9NVQ4 179 aa16.95■□□□□ 0.3
CTSA-217ENST00000607482 AQP7P3A6NL99 342 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 VIMP08670 466 aaKnown RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 PNMTP11086 282 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 GPX2P18283 190 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 RPS5P46782 204 aaKnown RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 ZNF83P51522 516 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 RPS4XP62701 263 aaKnown RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 RANBP3LQ86VV4 465 aaPredicted RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 DNAJA4Q8WW22 397 aaPredicted RBP16.94■□□□□ 0.3
CTSA-217ENST00000607482 STON2Q8WXE9 905 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 C18orf12Q96KH6 178 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 TMEM204Q9BSN7 226 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 MRGBPQ9NV56 204 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 MALT1Q9UDY8 824 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 RASD1Q9Y272 281 aa16.94■□□□□ 0.3
CTSA-217ENST00000607482 SASH3O75995 380 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 HOXB9P17482 250 aaPredicted RBP16.93■□□□□ 0.3
CTSA-217ENST00000607482 PTH2RP49190 550 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 ATP5J2P56134 94 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 C1DQ13901 141 aaKnown RBP16.93■□□□□ 0.3
CTSA-217ENST00000607482 MMEL1Q495T6 779 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 RUNDC3AQ59EK9 446 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 ALG10BQ5I7T1 473 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 DHRS4L2Q6PKH6 230 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 SLC22A25Q6T423 547 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 ATG4DQ86TL0 474 aaPredicted RBP16.93■□□□□ 0.3
CTSA-217ENST00000607482 C10orf53Q8N6V4 93 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 POMGNT2Q8NAT1 580 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 SLC26A7Q8TE54 656 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 SMAP2Q8WU79 429 aaPredicted RBP16.93■□□□□ 0.3
CTSA-217ENST00000607482 TRMT61AQ96FX7 289 aaKnown RBP16.93■□□□□ 0.3
CTSA-217ENST00000607482 RADILQ96JH8 1075 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 Q96MF0 132 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 BDH2Q9BUT1 245 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 TMEM120AQ9BXJ8 343 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 SLCO5A1Q9H2Y9 848 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 SLC52A3Q9NQ40 469 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 CHST2Q9Y4C5 530 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 FREM1Q5H8C1 2179 aa16.93■□□□□ 0.3
CTSA-217ENST00000607482 A0A1W2PR80 420 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 DPRXA6NFQ7 191 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 M0R1B8 84 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 ABCD4O14678 606 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 OR2T1O43869 369 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 TMCC2O75069 709 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 MTPNP58546 118 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 ZNF672Q499Z4 452 aaPredicted RBP16.92■□□□□ 0.3
CTSA-217ENST00000607482 TSPO2Q5TGU0 170 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 ULK3Q6PHR2 472 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 C5orf46Q6UWT4 87 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 PRSS57Q6UWY2 283 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 DLEU7Q6UYE1 221 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 BIVMQ86UB2 503 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 KBTBD8Q8NFY9 601 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 MFSD8Q8NHS3 518 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 TSPEARQ8WU66 669 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 SLC38A4Q969I6 547 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 TMEM45BQ96B21 275 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 SLC47A1Q96FL8 570 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 ANKRD27Q96NW4 1050 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 CGREF1Q99674 301 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 CPPED1Q9BRF8 314 aaPredicted RBP16.92■□□□□ 0.3
CTSA-217ENST00000607482 C1QTNF6Q9BXI9 259 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 GSX2Q9BZM3 304 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 IKZF5Q9H5V7 419 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 PIF1Q9H611 641 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 SLC7A10Q9NS82 523 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 CISD1Q9NZ45 108 aaKnown RBP16.92■□□□□ 0.3
CTSA-217ENST00000607482 TESQ9UGI8 421 aaKnown RBP16.92■□□□□ 0.3
CTSA-217ENST00000607482 MGAT4BQ9UQ53 548 aa16.92■□□□□ 0.3
CTSA-217ENST00000607482 DSCAMO60469 2012 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 A0A1B0GWA3 101 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 OR6C65A6NJZ3 312 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 ZNF587BE7ETH6 402 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 INHBBP09529 407 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 NQO1P15559 274 aaKnown RBP16.91■□□□□ 0.3
CTSA-217ENST00000607482 ZNF43P17038 809 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 MPGP29372 298 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 NTF4P34130 210 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 ARFIP2P53365 341 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 CDH11P55287 796 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 RBBP4Q09028 425 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 SF3A3Q12874 501 aaKnown RBP eCLIP16.91■□□□□ 0.3
CTSA-217ENST00000607482 CYLC2Q14093 348 aaPredicted RBP16.91■□□□□ 0.3
CTSA-217ENST00000607482 LSRQ86X29 649 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms