RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SETD7Q8WTS6 366 aaKnown RBP11.45□□□□□ -0.58
CDCA3-212ENST00000604599 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 PRSS27Q9BQR3 290 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 CACYBPQ9HB71 228 aaKnown RBP11.45□□□□□ -0.58
CDCA3-212ENST00000604599 CLDND1Q9NY35 253 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 SLC35A3Q9Y2D2 325 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 KANTRA0A1W2PQU2 76 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 SLC2A5P22732 501 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 PRKAR1BP31321 381 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 RORAP35398 523 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF658BQ4V348 819 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-212ENST00000604599 FAM46CQ5VWP2 391 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 OR4C11Q6IEV9 310 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 SPAG16Q8N0X2 631 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 NUP43Q8NFH3 380 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 OR9A2Q8NGT5 310 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 OR4C6Q8NH72 309 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 CASD1Q96PB1 797 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 ZDHHC5Q9C0B5 715 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 PIGMQ9H3S5 423 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 SPG21Q9NZD8 308 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF443Q9Y2A4 671 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-212ENST00000604599 V9GY05 133 aa11.45□□□□□ -0.58
CDCA3-212ENST00000604599 CACNA1CQ13936 2221 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 LCMT2O60294 686 aaKnown RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF3P17036 446 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ITPKBP27987 946 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 OR56A1Q8NGH5 318 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SLC22A8Q8TCC7 542 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 HAVCR1Q96D42 359 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 TINAGL1Q9GZM7 467 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 EXO5Q9H790 373 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 MYEF2Q9P2K5 600 aaKnown RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SCN3AQ9NY46 2000 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 KIAA1549LQ6ZVL6 1849 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 A0A0A6YYD5 115 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SULT1C2O00338 296 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SULT1B1O43704 296 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 RBBP9O75884 186 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 FGF18O76093 207 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 TIMP2P16035 220 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ITGB8P26012 769 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 FAUP35544 74 aaKnown RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 HAAOP46952 286 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 JMJD6Q6NYC1 403 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 TMEM64Q6YI46 380 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF836Q6ZNA1 936 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 BEST3Q8N1M1 668 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SDR9C7Q8NEX9 313 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 OR8S1Q8NH09 359 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 TMEM239Q8WW34 195 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 DVL3Q92997 716 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 TSPAN10Q9H1Z9 355 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 C6orf106Q9H6K1 298 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 USP36Q9P275 1121 aaKnown RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF223Q9UK11 482 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF337Q9Y3M9 751 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 ATG4BQ9Y4P1 393 aa11.44□□□□□ -0.58
CDCA3-212ENST00000604599 SCN2AQ99250 2005 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 F3P13726 295 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MPIP34949 423 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 NPBWR1P48145 328 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MRPS10P82664 201 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MICBQ29980 383 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 PAN3Q58A45 887 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MRM1Q6IN84 353 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 RAB12Q6IQ22 244 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 GLB1L2Q8IW92 636 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 SLC16A11Q8NCK7 471 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 RXFP4Q8TDU9 374 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 AICDAQ9GZX7 198 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 KLHL31Q9H511 634 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 GSN-AS1Q9NRJ2 163 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 A0A1W2PR48 441 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 OR6C76A6NM76 312 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 LILRB5O75023 590 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 POP7O75817 140 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 RCBTB2O95199 551 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 CXCL14O95715 111 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 HTR2AP28223 471 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 GRPRP30550 384 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF136P52737 540 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 SNTB1Q13884 538 aaKnown RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 LY6G6FQ5SQ64 297 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MAMSTRQ6ZN01 415 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 FRRS1Q6ZNA5 592 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 TMED4Q7Z7H5 227 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms