RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 A0A087WUJ7 227 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 CASKO14936 926 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 CTAG2O75638 210 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 RPS5P46782 204 aaKnown RBP14.95□□□□□ -0.02
TRIM28-215ENST00000601150 CDH12P55289 794 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 PSME3P61289 254 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 LRRC23Q53EV4 343 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-215ENST00000601150 CYBRD1Q53TN4 286 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 ENTPD8Q5MY95 495 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 GKAP1Q5VSY0 366 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-215ENST00000601150 STAC2Q6ZMT1 411 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 RBM45Q8IUH3 476 aaKnown RBP14.95□□□□□ -0.02
TRIM28-215ENST00000601150 ZNF100Q8IYN0 542 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 TMEM99Q8N816 258 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 KTI12Q96EK9 354 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-215ENST00000601150 WFIKKN1Q96NZ8 548 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 MED18Q9BUE0 208 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 PTDSS2Q9BVG9 487 aa14.95□□□□□ -0.02
TRIM28-215ENST00000601150 TEX15Q9BXT5 2789 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 IGKV1D-42A0A075B6H8 117 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 FAM221AA4D161 298 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 AQP7P3A6NL99 342 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 CPSF4LA6NMK7 179 aaKnown RBP14.94□□□□□ -0.02
TRIM28-215ENST00000601150 FTCDNL1E5RQL4 147 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 OR2T1O43869 369 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GOSR1O95249 250 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 FAM107AO95990 144 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 PPP3CBP16298 524 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 PSMB1P20618 241 aaKnown RBP14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GTF2E2P29084 291 aaKnown RBP14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GSK3BP49841 420 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 KRTAP10-9P60411 292 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 SLC17A1Q14916 467 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 CARM1Q86X55 608 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GABRG1Q8N1C3 465 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 SLC25A36Q96CQ1 311 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 SF3B5Q9BWJ5 86 aaKnown RBP14.94□□□□□ -0.02
TRIM28-215ENST00000601150 PCDHAC1Q9H158 963 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 ALG2Q9H553 416 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GMPR2Q9P2T1 348 aaKnown RBP14.94□□□□□ -0.02
TRIM28-215ENST00000601150 ABCD2Q9UBJ2 740 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 TAGLN3Q9UI15 199 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 PRSS50Q9UI38 385 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 GPR52Q9Y2T5 361 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 SH3GLB1Q9Y371 365 aa14.94□□□□□ -0.02
TRIM28-215ENST00000601150 TRAV36DV7A0A075B6V5 113 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 TRAPPC13A5PLN9 417 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 GSTA4O15217 222 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 CHP2O43745 196 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 SHOX2O60902 331 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-215ENST00000601150 MRPL33O75394 65 aaKnown RBP14.93□□□□□ -0.02
TRIM28-215ENST00000601150 VAMP5O95183 116 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 P2RY6Q15077 328 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 FAM69AQ5T7M9 428 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 ANKRD34AQ69YU3 496 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 TMEM225Q6GV28 225 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 Q6ZT83 130 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 CXorf67Q86X51 503 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-215ENST00000601150 P3H2Q8IVL5 708 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 OR9K2Q8NGE7 335 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 ADAMTS16Q8TE57 1224 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 TAAR8Q969N4 342 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 APH1AQ96BI3 265 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 EPYCQ99645 322 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 TMEM43Q9BTV4 400 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 HDHD5Q9BXW7 423 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 POLDIP3Q9BY77 421 aaKnown RBP14.93□□□□□ -0.02
TRIM28-215ENST00000601150 OR10A4Q9H209 315 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 SPAG4Q9NPE6 437 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 RASSF1Q9NS23 344 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 ARL8BQ9NVJ2 186 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 ZNF226Q9NYT6 803 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 RASD1Q9Y272 281 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 FLVCR1Q9Y5Y0 555 aa14.93□□□□□ -0.02
TRIM28-215ENST00000601150 LRBAP50851 2863 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 CXCR6O00574 342 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 FZD7O75084 574 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
TRIM28-215ENST00000601150 ADAP00813 363 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 TNFRSF1BP20333 461 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 EDNRAP25101 427 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 P2RY4P51582 365 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 SFRP5Q5T4F7 317 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 FBXW10Q5XX13 1052 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 CASP12Q6UXS9 341 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 LINC00114Q6XXX2 140 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.92□□□□□ -0.02
TRIM28-215ENST00000601150 GPAT4Q86UL3 456 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 STEAP2Q8NFT2 490 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 OR6S1Q8NH40 331 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 LZICQ8WZA0 190 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 TPD52L3Q96J77 140 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 KCTD14Q9BQ13 255 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-215ENST00000601150 ACTR6Q9GZN1 396 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 CLEC4MQ9H2X3 399 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-215ENST00000601150 PARPBPQ9NWS1 579 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 ADA2Q9NZK5 511 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 C6orf203Q9P0P8 240 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-215ENST00000601150 ADAM21Q9UKJ8 722 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 SLC7A7Q9UM01 511 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms