RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SLC25A18Q9H1K4 315 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 EVA1AQ9H8M9 152 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 NOX4Q9NPH5 578 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 NRIP3Q9NQ35 241 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ING4Q9UNL4 249 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 A0A087WV48 116 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 TRABD2BA6NFA1 517 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 ACOD1A6NK06 481 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 NPIPB9F8W1W9 429 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 FOXS1O43638 330 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 NDUFB5O43674 189 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 PRKNO60260 465 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 CSTAP01040 98 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 HES5Q5TA89 166 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 SLITRK4Q8IW52 837 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 ARHGEF39Q8N4T4 335 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 AVL9Q8NBF6 648 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 OR11H4Q8NGC9 324 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF431Q8TF32 576 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 WBP1LQ9NX94 342 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 CAMK2AQ9UQM7 478 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 TRIOO75962 3097 aa18.52■□□□□ 0.56
SHKBP1-225ENST00000600733 A0A087WUJ7 227 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 A0A1B0GVT2 93 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 PIN1P1O15428 100 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 GATBO75879 557 aaKnown RBP18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 TNFP01375 233 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 GPR143P51810 404 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 YPEL5P62699 121 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 HYAL1Q12794 435 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 DPY19L2P2Q6ZN68 376 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 OVCH1Q7RTY7 1134 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 CMTM4Q8IZR5 234 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 GIMAP1Q8WWP7 306 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 LRFN5Q96NI6 719 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 CDCA3Q99618 268 aaPredicted RBP18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 GFI1Q99684 422 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 GPR174Q9BXC1 333 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 BEX1Q9HBH7 125 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 EMC7Q9NPA0 242 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 ANKRD10Q9NXR5 420 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 MRPL15Q9P015 296 aaKnown RBP18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 ZNF346Q9UL40 294 aaKnown RBP18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 PCDHGA9Q9Y5G4 932 aaKnown RBP18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 COL4A2P08572 1712 aa18.52■□□□□ 0.55
SHKBP1-225ENST00000600733 FAM221BA6H8Z2 402 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 OR5K3A6NET4 321 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 PRR32B1ATL7 298 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 CT45A8P0DMV1 189 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 CT45A9P0DMV2 189 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 ANXA3P12429 323 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 SRMP19623 302 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 PGDP52209 483 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 BTG2P78543 158 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 LGALS3BPQ08380 585 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 SNTB2Q13425 540 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 C1orf61Q13536 156 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 KLF9Q13886 244 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 GSG1Q2KHT4 349 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 CT45A2Q5DJT8 189 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 OOSP2Q86WS3 158 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 OR8H1Q8NGG4 311 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 DACT3Q96B18 629 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 OR2M2Q96R28 347 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 DDOQ99489 341 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 TNFRSF10AO00220 468 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 NANOS3P60323 173 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 CAMK2BQ13554 666 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 ST3GAL2Q16842 350 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 CD276Q5ZPR3 534 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 TAF8Q7Z7C8 310 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 MOSPD2Q8NHP6 518 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 SMIM4Q8WVI0 70 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 ADAMTS14Q8WXS8 1223 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 Q9N2J8 555 aa18.51■□□□□ 0.55
SHKBP1-225ENST00000600733 H2AFB2P0C5Z0 115 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 GDNFP39905 211 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 ANGPT1Q15389 498 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 CLPPQ16740 277 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 UBE2NLQ5JXB2 153 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 ZNF433Q8N7K0 673 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 GATSQ8NAP1 163 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 COPZ2Q9P299 210 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 ERVK-19Q9WJR5 959 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 OR10H1Q9Y4A9 318 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 MYO15AQ9UKN7 3530 aa18.5■□□□□ 0.55
SHKBP1-225ENST00000600733 CEP290O15078 2479 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 TCRBV21S2A2A0A5A6 115 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 SERINC4A6NH21 518 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 MAOAP21397 527 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 CLDN12P56749 244 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 HHEXQ03014 270 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 UNQ9370/PRO34162Q6UXP9 181 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 LINGO2Q7L985 606 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 BCORP1Q8N888 145 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 C16orf52Q8NHV5 167 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 RPLP0P6Q8NHW5 317 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 C3orf49Q96BT1 292 aa18.49■□□□□ 0.55
SHKBP1-225ENST00000600733 TSSK2Q96PF2 358 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms