RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 COX5AP20674 150 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 PRDX6P30041 224 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 SLC7A2P52569 658 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 CDH12P55289 794 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
RPS28-203ENST00000600659 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 ULK3Q6PHR2 472 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 LINC00114Q6XXX2 140 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 TMEM200AQ86VY9 491 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 CXorf67Q86X51 503 aaPredicted RBP13.94□□□□□ -0.18
RPS28-203ENST00000600659 MICU2Q8IYU8 434 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 ZIC4Q8N9L1 334 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 OR2T12Q8NG77 320 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
RPS28-203ENST00000600659 MCHR1Q99705 422 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 KLHL4Q9C0H6 718 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 SEC14L4Q9UDX3 406 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 CADP27708 2225 aa13.94□□□□□ -0.18
RPS28-203ENST00000600659 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 TNFRSF1BP20333 461 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 CRYGSP22914 178 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 RPS5P46782 204 aaKnown RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 NUDT2P50583 147 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 LIPEQ05469 1076 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 LTBQ06643 244 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 TSC22D1Q15714 1073 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 SEZ6L2Q6UXD5 910 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 Q6ZT83 130 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ARPINQ7Z6K5 226 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 RANBP3LQ86VV4 465 aaPredicted RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 P3H2Q8IVL5 708 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 MFSD8Q8NHS3 518 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 VANGL1Q8TAA9 524 aaPredicted RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 TAAR8Q969N4 342 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ZNF385AQ96PM9 386 aaKnown RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 OR10A4Q9H209 315 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 CLEC4MQ9H2X3 399 aaPredicted RBP13.93□□□□□ -0.18
RPS28-203ENST00000600659 EFCAB1Q9HAE3 211 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 RPS6KB2Q9UBS0 482 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
RPS28-203ENST00000600659 ELOVL7A1L3X0 281 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 GOSR1O95249 250 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 AHSA1O95433 338 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 PNMTP11086 282 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 PTNP21246 168 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 KDELR2P33947 212 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 GSK3BP49841 420 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 NCALDP61601 193 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 ENTPD8Q5MY95 495 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 SFRP5Q5T4F7 317 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 SWT1Q5T5J6 900 aaKnown RBP13.92□□□□□ -0.18
RPS28-203ENST00000600659 ZNF613Q6PF04 617 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 STK32CQ86UX6 486 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 CDC20BQ86Y33 519 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 OR9K2Q8NGE7 335 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 ADAMTS16Q8TE57 1224 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 TMEM45BQ96B21 275 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 SLC47A1Q96FL8 570 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 HOPXQ9BPY8 73 aaPredicted RBP13.92□□□□□ -0.18
RPS28-203ENST00000600659 ZNF426Q9BUY5 554 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 ACTR6Q9GZN1 396 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 LIME1Q9H400 295 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 TMEM27Q9HBJ8 222 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 ADPRHL2Q9NX46 363 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 EMC3Q9P0I2 261 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 B3GAT1Q9P2W7 334 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 NDRG3Q9UGV2 375 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 SLC13A4Q9UKG4 626 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 GPR52Q9Y2T5 361 aa13.92□□□□□ -0.18
RPS28-203ENST00000600659 NOSIPQ9Y314 301 aaKnown RBP13.92□□□□□ -0.18
RPS28-203ENST00000600659 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
RPS28-203ENST00000600659 CPSF4LA6NMK7 179 aaKnown RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 PDLIM1O00151 329 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 GPR171O14626 319 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 CHP2O43745 196 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 SHOX2O60902 331 aaPredicted RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 ADAP00813 363 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 BGLAPP02818 100 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 FOXG1P55316 489 aaPredicted RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 PSME3P61289 254 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 FAM69AQ5T7M9 428 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 CARM1Q86X55 608 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 EPHX4Q8IUS5 362 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 RASSF5Q8WWW0 418 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 S100PBPQ96BU1 408 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 CMTM5Q96DZ9 223 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 SLC41A3Q96GZ6 507 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 HS3ST6Q96QI5 342 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 PRSS27Q9BQR3 290 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 NAA11Q9BSU3 229 aaPredicted RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 MED18Q9BUE0 208 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 SF3B5Q9BWJ5 86 aaKnown RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 TAPBPLQ9BX59 468 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 POLDIP3Q9BY77 421 aaKnown RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 PLEKHF2Q9H8W4 249 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms