RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MAST4O15021 2626 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 ABCA4P78363 2273 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 IGKV1D-42A0A075B6H8 117 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 A0A087WUJ7 227 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 FAM221AA4D161 298 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 AQP7P3A6NL99 342 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 CPSF4LA6NMK7 179 aaKnown RBP12.28□□□□□ -0.44
UPF1-205ENST00000598209 CASKO14936 926 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 DCTN3O75935 186 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 EDNRAP25101 427 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 KDELR2P33947 212 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 CDH12P55289 794 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 LRRC23Q53EV4 343 aaPredicted RBP12.28□□□□□ -0.44
UPF1-205ENST00000598209 ENTPD8Q5MY95 495 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 ZNF613Q6PF04 617 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
UPF1-205ENST00000598209 P3H2Q8IVL5 708 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 GABRG1Q8N1C3 465 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 MFSD8Q8NHS3 518 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 SLC25A36Q96CQ1 311 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 KTI12Q96EK9 354 aaPredicted RBP12.28□□□□□ -0.44
UPF1-205ENST00000598209 LRRC37BQ96QE4 947 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
UPF1-205ENST00000598209 RASSF1Q9NS23 344 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 FAM53CQ9NYF3 392 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 BAG5Q9UL15 447 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 SLC9A8Q9Y2E8 581 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 GPR52Q9Y2T5 361 aa12.28□□□□□ -0.44
UPF1-205ENST00000598209 TRAV36DV7A0A075B6V5 113 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 FTCDNL1E5RQL4 147 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 NDUFAB1O14561 156 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 GOSR1O95249 250 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 ADAP00813 363 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 TNFRSF1BP20333 461 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 PSMB1P20618 241 aaKnown RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 PTNP21246 168 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 GTF2E2P29084 291 aaKnown RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 GSK3BP49841 420 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 P2RY4P51582 365 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 PSME3P61289 254 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 SLC17A1Q14916 467 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 CYBRD1Q53TN4 286 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 FBXW10Q5XX13 1052 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 TMEM225Q6GV28 225 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 Q6ZT83 130 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 C22orf34Q6ZV56 151 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 CARM1Q86X55 608 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 ADAMTS16Q8TE57 1224 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 APH1AQ96BI3 265 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 ZC3HAV1LQ96H79 300 aaKnown RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 SF3B5Q9BWJ5 86 aaKnown RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 ACTR6Q9GZN1 396 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
UPF1-205ENST00000598209 ALG2Q9H553 416 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 ABCD2Q9UBJ2 740 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 SH3GLB1Q9Y371 365 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 FLVCR1Q9Y5Y0 555 aa12.27□□□□□ -0.45
UPF1-205ENST00000598209 TRAPPC13A5PLN9 417 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 CXCR6O00574 342 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 GSTA4O15217 222 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 CHP2O43745 196 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 OR2T1O43869 369 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 FZD7O75084 574 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 MRPL33O75394 65 aaKnown RBP12.26□□□□□ -0.45
UPF1-205ENST00000598209 PPP3CBP16298 524 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 NTF4P34130 210 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 P2RY6Q15077 328 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 POU4F3Q15319 338 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 FAM69AQ5T7M9 428 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 CASP12Q6UXS9 341 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 GPAT4Q86UL3 456 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 TSPYL5Q86VY4 417 aaPredicted RBP12.26□□□□□ -0.45
UPF1-205ENST00000598209 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 TPD52L3Q96J77 140 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 EPYCQ99645 322 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 TMEM43Q9BTV4 400 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 HDHD5Q9BXW7 423 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 OR10A4Q9H209 315 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 ARL8BQ9NVJ2 186 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 C6orf203Q9P0P8 240 aaPredicted RBP12.26□□□□□ -0.45
UPF1-205ENST00000598209 TAGLN3Q9UI15 199 aa12.26□□□□□ -0.45
UPF1-205ENST00000598209 SHOX2O60902 331 aaPredicted RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 VAMP5O95183 116 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 LYPD3O95274 346 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 CNOT4O95628 575 aaKnown RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 FAM107AO95990 144 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 IGHV3-9P01782 118 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 HRGP04196 525 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 THY1P04216 161 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms