RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PRSS27Q9BQR3 290 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 TMEM43Q9BTV4 400 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 SLC19A3Q9BZV2 496 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 KLHL4Q9C0H6 718 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF556Q9HAH1 456 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 C8orf4Q9NR00 106 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 TMEM5Q9Y2B1 443 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 ORC6Q9Y5N6 252 aa10.86□□□□□ -0.67
SHKBP1-213ENST00000597325 TRGV8A0A0C4DH27 118 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 GJE1A6NN92 205 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 SHISA8B8ZZ34 492 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 CASQ2O14958 399 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 CRYABP02511 175 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 HPNP05981 417 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 TFPIP10646 304 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 FUT4P22083 530 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 FKBP2P26885 142 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 LIMS1P48059 325 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 UGT2B15P54855 530 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 SLC10A1Q14973 349 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 LAPTM4AQ15012 233 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 SEC23BQ15437 767 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 LRRC36Q1X8D7 754 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 WIPI1Q5MNZ9 446 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 FAM180AQ6UWF9 173 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 C5orf46Q6UWT4 87 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 WDR88Q6ZMY6 472 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 ZBTB49Q6ZSB9 765 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 TMEM179BQ7Z7N9 219 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 YRDCQ86U90 279 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 EPHX4Q8IUS5 362 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 NRMQ8IXM6 262 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 RNF113BQ8IZP6 322 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 HS3ST5Q8IZT8 346 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 C10orf53Q8N6V4 93 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 OR5M1Q8NGP8 315 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 NRGNQ92686 78 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF524Q96C55 264 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 RBM4BQ9BQ04 359 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 FUZQ9BT04 418 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 RBM4Q9BWF3 364 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 OSBPL10Q9BXB5 764 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 GABARAPL1Q9H0R8 117 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 LDAHQ9H6V9 325 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 EXO5Q9H790 373 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 AKAP6Q13023 2319 aa10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 ANK3Q12955 4377 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-213ENST00000597325 A0A087WUU8 490 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 TMEM72A0PK05 275 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 OR2M5A3KFT3 312 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 A8MVM7 634 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 H3BML4 177 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 LINC01387J3KSC0 135 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF208O43345 1280 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 PIP5K1CO60331 668 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ZIC3O60481 467 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 AHSA1O95433 338 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 CLDN14O95500 239 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 PEPDP12955 493 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 IFI30P13284 250 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ANXA8P13928 327 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ALDH6A1Q02252 535 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 CRYZQ08257 329 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 OGFRL1Q5TC84 451 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 LPCAT4Q643R3 524 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 RPUSD3Q6P087 351 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 TBPL2Q6SJ96 375 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ADGRG3Q86Y34 549 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 CBR4Q8N4T8 237 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 AQP11Q8NBQ7 271 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 ATP6V1C2Q8NEY4 427 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 OR9Q2Q8NGE9 314 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 PFN4Q8NHR9 129 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 POC1BQ8TC44 478 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 DNAJC9Q8WXX5 260 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 SMPDL3BQ92485 455 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 PSD2Q9BQI7 771 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 TMEM185BQ9H7F4 350 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 MGAT4BQ9UQ53 548 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
SHKBP1-213ENST00000597325 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 TRAV36DV7A0A075B6V5 113 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 PDLIM1O00151 329 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 EI24O14681 340 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 HPRP00739 348 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 ADAP00813 363 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 CELA3AP09093 270 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 SAGP10523 405 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 CDH2P19022 906 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 CHMP24386 653 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 IGFBP5P24593 272 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 GTF2E2P29084 291 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 SFTPDP35247 375 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 GPR4P46093 362 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 PTDSS1P48651 473 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 ALDH3A2P51648 485 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 IL1RL1Q01638 556 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms