RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 MAGEA5P43359 124 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 HTR3AP46098 478 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 OMPP47874 163 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PTDSS1P48651 473 aaKnown RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PPIAP62937 165 aaKnown RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ADORA2A-AS1P86434 159 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PLGLB1Q02325 96 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 GK3PQ14409 553 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 CDSNQ15517 529 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TRIP10Q15642 601 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 LRRC36Q1X8D7 754 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 WIPI1Q5MNZ9 446 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PPP4R4Q6NUP7 873 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TTC33Q6PID6 262 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 POMZP3Q6PJE2 187 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 FAM180AQ6UWF9 173 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ZBTB49Q6ZSB9 765 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 MBOAT2Q6ZWT7 520 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 STK32CQ86UX6 486 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 MEX3DQ86XN8 651 aaKnown RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 HIPK1Q86Z02 1210 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ZDHHC13Q8IUH4 622 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 RNF113BQ8IZP6 322 aaKnown RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 SVOPLQ8N434 492 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 CBR4Q8N4T8 237 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 OR4K5Q8NGD3 323 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 OR9Q2Q8NGE9 314 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PFN4Q8NHR9 129 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TMEM239Q8WW34 195 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ACOT11Q8WXI4 607 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ZBTB8AQ96BR9 441 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 MPP4Q96JB8 637 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 HS6ST2Q96MM7 605 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TAAR6Q96RI8 345 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 FEVQ99581 238 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 PSD2Q9BQI7 771 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 OR2B2Q9GZK3 357 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 SMURF2Q9HAU4 748 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 C20orf141Q9NUB4 165 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 SELENONQ9NZV5 590 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 DKKL1Q9UK85 242 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 TMCC3Q9ULS5 477 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ZNF337Q9Y3M9 751 aa8.49□□□□□ -1.05
TRIM28-208ENST00000597172 ZC3H12DA2A288 527 aaKnown RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OR2M5A3KFT3 312 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 FAM171A2A8MVW0 826 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 FAM47E-STBD1D6RA91 191 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 KLF4O43474 513 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 SUSD5O60279 629 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 RASAL1O95294 804 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 LY6G6DO95868 133 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OPN1LWP04000 364 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 MAKP20794 623 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 CBLP22681 906 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 EIF1P41567 113 aaKnown RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 GFRA1P56159 465 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 PPP2R2BQ00005 443 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 PRKCDQ05655 676 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 SLC10A1Q14973 349 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 TOMM20Q15388 145 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 SNCBQ16143 134 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OTUD3Q5T2D3 398 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 RPUSD3Q6P087 351 aaKnown RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 C1orf94Q6P1W5 598 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 FAHD1Q6P587 224 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 GFRALQ6UXV0 394 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ZNF730Q6ZMV8 503 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 SLC22A16Q86VW1 577 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 NRMQ8IXM6 262 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OR10G2Q8NGC3 310 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 EME1Q96AY2 570 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 KTI12Q96EK9 354 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 NIPSNAP1Q9BPW8 284 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 TMEM43Q9BTV4 400 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 C9orf16Q9BUW7 83 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OSBPL10Q9BXB5 764 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 OR11A1Q9GZK7 315 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 GABARAPL1Q9H0R8 117 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 RASSF4Q9H2L5 321 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 ACKR4Q9NPB9 350 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 QPCTLQ9NXS2 382 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 TMEFF2Q9UIK5 374 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-208ENST00000597172 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
TRIM28-208ENST00000597172 NCKAP5O14513 1909 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 ARRDC5A6NEK1 342 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 A8MVM7 634 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 LRRN3E7EW58 273 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 KPNA4O00629 521 aaPredicted RBP8.47□□□□□ -1.05
TRIM28-208ENST00000597172 DLGAP1O14490 977 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 EI24O14681 340 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 ZNF208O43345 1280 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 OR10H3O60404 316 aa8.47□□□□□ -1.05
TRIM28-208ENST00000597172 MITFO75030 526 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms