RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SDF2Q99470 211 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 OR51I1Q9H343 314 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 SLCO1B3Q9NPD5 702 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 ESM1Q9NQ30 184 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 BTNL2Q9UIR0 455 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 SPEF1Q9Y4P9 236 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 GPC6Q9Y625 555 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
SHKBP1-208ENST00000595726 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 B4DSR2 109 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 C1QCP02747 245 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 ARAFP10398 606 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 IFNGR1P15260 489 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 EPHA1P21709 976 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 PCMT1P22061 227 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 CDKN2CP42773 168 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 ATP12AP54707 1039 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 FUT5Q11128 374 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 RIN1Q13671 783 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 ADIPOQQ15848 244 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 GSTA3Q16772 222 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 ARHGAP11BQ3KRB8 267 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 TNFAIP8L2Q6P589 184 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 USP43Q70EL4 1123 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 CARM1Q86X55 608 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 LRRC17Q8N6Y2 441 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 GOLGA6L1Q8N7Z2 621 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 GLB1L3Q8NCI6 653 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 RFWD2Q8NHY2 731 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 TMEM186Q96B77 213 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC35A5Q9BS91 424 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF350Q9GZX5 532 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 HOXD1Q9GZZ0 328 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 PLK3Q9H4B4 646 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 SDR39U1Q9NRG7 319 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 CA10Q9NS85 328 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 USP22Q9UPT9 525 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 RYR3Q15413 4870 aa11.93□□□□□ -0.5
SHKBP1-208ENST00000595726 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF716A6NP11 495 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 B9A039 149 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC22A3O75751 556 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 SASH3O75995 380 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 AVPP01185 164 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 OR12D1P0DN82 309 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 DIO1P49895 249 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 KHKP50053 298 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 P2RX1P51575 399 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 LRRC74AQ0VAA2 488 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 SELENBP1Q13228 472 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 FAHD2BQ6P2I3 314 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 EPGNQ6UW88 154 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 OLIG3Q7RTU3 272 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF614Q8N883 585 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 MRPL24Q96A35 216 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 FAHD2AQ96GK7 314 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 LRRC37BQ96QE4 947 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 OR52E6Q96RD3 313 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 PANX1Q96RD7 426 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZBTB18Q99592 522 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 NMUR2Q9GZQ4 415 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 EXD2Q9NVH0 621 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZIM2Q9NZV7 527 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 MALT1Q9UDY8 824 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF281Q9Y2X9 895 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 DTNAQ9Y4J8 743 aa11.92□□□□□ -0.5
SHKBP1-208ENST00000595726 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 IGKV3D-15A0A087WSY6 115 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 CCDC154A6NI56 674 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 H3BNH8 94 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 PDLIM1O00151 329 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 WNT9BO14905 357 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 UBDO15205 165 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 FCMRO60667 390 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 STX11O75558 287 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 UGT2B17O75795 530 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 AGR2O95994 175 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 IL6P05231 212 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 CDH2P19022 906 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 CHI3L1P36222 383 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 LIMS1P48059 325 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 GPR68Q15743 365 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 ZNF141Q15928 474 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 HIKESHIQ53FT3 197 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 PDZK1Q5T2W1 519 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 ABLIM2Q6H8Q1 611 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms