RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PGRP06401 933 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 UFM1P61960 85 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 LSRQ86X29 649 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-203ENST00000593641 PNPT1Q8TCS8 783 aaKnown RBP19.8■□□□□ 0.76
SSBP4-203ENST00000593641 NANOS1Q8WY41 292 aaKnown RBP19.8■□□□□ 0.76
SSBP4-203ENST00000593641 TEX37Q96LM6 180 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 ZNF385AQ96PM9 386 aaKnown RBP19.8■□□□□ 0.76
SSBP4-203ENST00000593641 OR52E6Q96RD3 313 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 ZBTB18Q99592 522 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 TAPBPLQ9BX59 468 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 ADAM19Q9H013 955 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 PIF1Q9H611 641 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 OBP2BQ9NPH6 170 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 AIG1Q9NVV5 245 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 HAO1Q9UJM8 370 aa19.8■□□□□ 0.76
SSBP4-203ENST00000593641 LIPT2A6NK58 231 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 AQP7P3A6NL99 342 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 LY6HO94772 140 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 GSNP06396 782 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 ALDOCP09972 364 aaKnown RBP19.79■□□□□ 0.76
SSBP4-203ENST00000593641 IGHV4-31P0DP07 118 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 BGNP21810 368 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 CDKN2CP42773 168 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 GZMKP49863 264 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 PDLIM4P50479 330 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 COPZ1P61923 177 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 SNRPD2P62316 118 aaKnown RBP19.79■□□□□ 0.76
SSBP4-203ENST00000593641 LSM11P83369 360 aaKnown RBP eCLIP19.79■□□□□ 0.761e-8■□□□□ 9.9
SSBP4-203ENST00000593641 STX3Q13277 289 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 HIKESHIQ53FT3 197 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 TMEM225Q6GV28 225 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 PIMREGQ9BSJ6 248 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 ADPRHL2Q9NX46 363 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 P2RX2Q9UBL9 471 aa19.79■□□□□ 0.76
SSBP4-203ENST00000593641 ZNF587BE7ETH6 402 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 KLF11O14901 512 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 KRT75O95678 551 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 GGTLC2Q14390 218 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 LIN52Q52LA3 116 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 COX20Q5RI15 118 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 CADM2Q8N3J6 435 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 AURKBQ96GD4 344 aaPredicted RBP19.78■□□□□ 0.76
SSBP4-203ENST00000593641 RLIMQ9NVW2 624 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 TMEM45AQ9NWC5 275 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 PRDM4Q9UKN5 801 aa19.78■□□□□ 0.76
SSBP4-203ENST00000593641 CDHR4A6H8M9 788 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 NDUFS8O00217 210 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 LMX1BO60663 402 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 GKN3PP0CG01 181 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 PAX7P23759 505 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 UBE2NP61088 152 aaKnown RBP19.77■□□□□ 0.76
SSBP4-203ENST00000593641 SWI5Q1ZZU3 235 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 WBP2NLQ6ICG8 309 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 SPATA19Q7Z5L4 167 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 ZIC4Q8N9L1 334 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 OR52P1PQ8NH57 321 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 PNPOQ9NVS9 261 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 CALML5Q9NZT1 146 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 KCNS2Q9ULS6 477 aa19.77■□□□□ 0.76
SSBP4-203ENST00000593641 OR6C65A6NJZ3 312 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 A8MVM7 634 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 RFXANKO14593 260 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 VAMP5O95183 116 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 IL12AP29459 219 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 TBRG1Q3YBR2 411 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 FAM166AQ6J272 317 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 ZNF836Q6ZNA1 936 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 SLC46A3Q7Z3Q1 461 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 VRK2Q86Y07 508 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 GLB1L3Q8NCI6 653 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-203ENST00000593641 OR1K1Q8NGR3 316 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 BOD1Q96IK1 185 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 SORCS2Q96PQ0 1159 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 ALKBH3Q96Q83 286 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-203ENST00000593641 SLC38A2Q96QD8 506 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 PAIP2Q9BPZ3 127 aaKnown RBP19.76■□□□□ 0.75
SSBP4-203ENST00000593641 KATNB1Q9BVA0 655 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 CACYBPQ9HB71 228 aaKnown RBP19.76■□□□□ 0.75
SSBP4-203ENST00000593641 MYOZ1Q9NP98 299 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-203ENST00000593641 KCNK9Q9NPC2 374 aa19.76■□□□□ 0.75
SSBP4-203ENST00000593641 IGHV1-18A0A0C4DH31 117 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 SDHDO14521 159 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 FRS3O43559 492 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 LGI1O95970 557 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 CRYAAP02489 173 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 SRD5A1P18405 259 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 NCF2P19878 526 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-203ENST00000593641 SERPINF1P36955 418 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 CRISP3P54108 245 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 BST1Q10588 318 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 BNIP2Q12982 314 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 CARTPTQ16568 116 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 MST1LQ2TV78 715 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 PRAMEF8Q5VWM4 474 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 PRAMEF7Q5VXH5 474 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 WDR93Q6P2C0 686 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 MREGQ8N565 214 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 VRK1Q99986 396 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-203ENST00000593641 CENPHQ9H3R5 247 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 CHODLQ9H9P2 273 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms