RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GIFP27352 417 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 OR1D2P34982 312 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TNFRSF4P43489 277 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SLC6A8P48029 635 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 BDH1Q02338 343 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ENPEPQ07075 957 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ELAVL3Q14576 367 aaKnown RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 HEPACAMQ14CZ8 416 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TRIP10Q15642 601 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM44Q2T9K0 475 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 DCAF4L1Q3SXM0 396 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CLVS2Q5SYC1 327 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 OR4C11Q6IEV9 310 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM220Q6QAJ8 160 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM107Q6UX40 140 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TMIGD1Q6UXZ0 262 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 GTSCR1Q86UQ5 136 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CATSPERDQ86XM0 798 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 LRRC8AQ8IWT6 810 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 NELFCDQ8IXH7 590 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 LIX1Q8N485 282 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SNX31Q8N9S9 440 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SYT14Q8NB59 555 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 FAM83FQ8NEG4 500 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SPRYD4Q8WW59 207 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ARNTL2Q8WYA1 636 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 HAS2Q92819 552 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CCDC124Q96CT7 223 aaKnown RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 TMA16Q96EY4 203 aaKnown RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 GLT1D1Q96MS3 346 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CCNL2Q96S94 520 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ATOH8Q96SQ7 321 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CENPKQ9BS16 269 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 CHID1Q9BWS9 393 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 UBE2ZQ9H832 354 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ACOXLQ9NUZ1 547 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 MIS18AQ9NYP9 233 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 PAK5Q9P286 719 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 IL36AQ9UHA7 158 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 DCDC2Q9UHG0 476 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SLC12A6Q9UHW9 1150 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 LNPEPQ9UIQ6 1025 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 MOB4Q9Y3A3 225 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 SAMHD1Q9Y3Z3 626 aaKnown RBP4.1□□□□□ -1.75
SMAD4-216ENST00000593223 COLEC10Q9Y6Z7 277 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 OTOFQ9HC10 1997 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 UBN2Q6ZU65 1347 aa4.1□□□□□ -1.75
SMAD4-216ENST00000593223 ABCA12Q86UK0 2595 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 DOCK3Q8IZD9 2030 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 DOPEY1Q5JWR5 2465 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 IGKV3D-20A0A0C4DH25 116 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 MEX3AA1L020 520 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 METTL21EPA6NDL7 271 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 MGAT4DA6NG13 374 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 A8MU76 341 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 A8MUA0 341 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GOLGA8KD6RF30 607 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 WWP2O00308 870 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 SLC1A7O00341 560 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 FOXE1O00358 373 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CLDN5O00501 218 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GPR171O14626 319 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GPAA1O43292 621 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PRAF2O60831 178 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 NSA2O95478 260 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 H6PDO95479 791 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PGK1P00558 417 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 SERPIND1P05546 499 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ERCC1P07992 297 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GNSP15586 552 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CYP3A5P20815 502 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PSMB6P28072 239 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PDHA2P29803 388 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 SSTR1P30872 391 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CCL11P51671 97 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 NDST1P52848 882 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 EMP2P54851 167 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM50BP56557 158 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GPX6P59796 221 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 MS4A2Q01362 244 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 DHODHQ02127 395 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PAX5Q02548 391 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ZFP36L1Q07352 338 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 IFFO1Q0D2I5 559 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GCKRQ14397 625 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PSG3Q16557 428 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 XKR4Q5GH76 650 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PYHIN1Q6K0P9 492 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 FRRS1Q6ZNA5 592 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CENPUQ71F23 418 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CYP4Z1Q86W10 505 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CBWD2Q8IUF1 395 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 GABRG1Q8N1C3 465 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 METTL4Q8N3J2 472 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PROKR2Q8NFJ6 384 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 OR4D10Q8NGI6 311 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms