RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MAPK11Q15759 364 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 COX20Q5RI15 118 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 TSPO2Q5TGU0 170 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 PRAMEF8Q5VWM4 474 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 PRAMEF7Q5VXH5 474 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 CXXC5Q7LFL8 322 aaKnown RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 HMGN2P46Q86SG4 172 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 OR9K2Q8NGE7 335 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 OR52E4Q8NGH9 312 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 PAIP2Q9BPZ3 127 aaKnown RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 WDR55Q9H6Y2 383 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 CACYBPQ9HB71 228 aaKnown RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 SDR39U1Q9NRG7 319 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-205ENST00000592333 IFT52Q9Y366 437 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 COL6A5A8TX70 2615 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 ABCA1O95477 2261 aa16.54■□□□□ 0.24
CCDC43-205ENST00000592333 M0R1B8 84 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 GSNP06396 782 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 APOBEC3AP31941 199 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 ACAA2P42765 397 aaKnown RBP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 CEACAM7Q14002 265 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM225Q6GV28 225 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 PODNL1Q6PEZ8 512 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 KLHL24Q6TFL4 600 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 AAED1Q7RTV5 226 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 MAPK1IP1LQ8NDC0 245 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 SLC38A5Q8WUX1 472 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 ITCHQ96J02 903 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 TPT1P8Q9HAU6 139 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 PMF1-BGLAPU3KQ54 211 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 CR1P17927 2039 aa16.53■□□□□ 0.24
CCDC43-205ENST00000592333 SONP18583 2426 aaKnown RBP16.53■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM120BA0PK00 339 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 ZC3H12DA2A288 527 aaKnown RBP16.52■□□□□ 0.24
CCDC43-205ENST00000592333 ANP32DO95626 131 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 C1QCP02747 245 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 CRATP43155 626 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 C3orf36Q3SXR2 165 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM99Q8N816 258 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 ZIC4Q8N9L1 334 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 ANKK1Q8NFD2 765 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 STK35Q8TDR2 534 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 PROX1Q92786 737 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 SPATA9Q9BWV2 254 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 RAD21L1Q9H4I0 556 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 BCL2L10Q9HD36 194 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 RLIMQ9NVW2 624 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM45AQ9NWC5 275 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 TMEM160Q9NX00 188 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 FBXO9Q9UK97 447 aaPredicted RBP16.52■□□□□ 0.24
CCDC43-205ENST00000592333 RASD1Q9Y272 281 aa16.52■□□□□ 0.24
CCDC43-205ENST00000592333 A0A096LNT2 108 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 A8MV72 311 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 KLF11O14901 512 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 NPIPB7O75200 414 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 HOXB1P14653 301 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 EFNA4P52798 201 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 FOXG1P55316 489 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 DSTNP60981 165 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 OR7A5Q15622 319 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 B3GLCTQ6Y288 498 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF836Q6ZNA1 936 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 ANKRD42Q8N9B4 389 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 PNPT1Q8TCS8 783 aaKnown RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 MAGEE2Q8TD90 523 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 DNAJA3Q96EY1 480 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 MANSC1Q9H8J5 431 aa16.51■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF443Q9Y2A4 671 aaPredicted RBP16.51■□□□□ 0.23
CCDC43-205ENST00000592333 IGHV4-30-2A0A087WSY4 118 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 A0A1W2PR80 420 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-205ENST00000592333 FZD7O75084 574 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 AKR7A3O95154 331 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 BCHEP06276 602 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 BMP2P12643 396 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 P2RY4P51582 365 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 VLDLRP98155 873 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 SPOCK1Q08629 439 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 FADDQ13158 208 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 C1orf140Q5VVS0 124 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 C5orf46Q6UWT4 87 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 CREB3L2Q70SY1 520 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 VRK2Q86Y07 508 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 FAM169BQ8N8A8 192 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 MFSD8Q8NHS3 518 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 ZNF385AQ96PM9 386 aaKnown RBP16.5■□□□□ 0.23
CCDC43-205ENST00000592333 LINC00470Q9BZP3 86 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 C12orf10Q9HB07 376 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 YAE1D1Q9NRH1 226 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 SLC6A13Q9NSD5 602 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 ATP23Q9Y6H3 246 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 MXRA5Q9NR99 2828 aa16.5■□□□□ 0.23
CCDC43-205ENST00000592333 FBN1P35555 2871 aaKnown RBP16.49■□□□□ 0.23
CCDC43-205ENST00000592333 ARPC4-TTLL3A0A0A6YYG9 625 aa16.49■□□□□ 0.23
CCDC43-205ENST00000592333 TMEM229AB2RXF0 380 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms