RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FOXD3Q9UJU5 478 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-212ENST00000590096 PRPF19Q9UMS4 504 aaKnown RBP18.99■□□□□ 0.63
ATG4D-212ENST00000590096 HCFC1P51610 2035 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 CENPEQ02224 2701 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 UNC79Q9P2D8 2635 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 IGKV1D-42A0A075B6H8 117 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 ARPC2O15144 300 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 OR5F1O95221 314 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 CD8BP10966 210 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 FBXL19-AS1Q494R0 122 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 OTUD3Q5T2D3 398 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 FAM69AQ5T7M9 428 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 TTC33Q6PID6 262 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 GDF7Q7Z4P5 450 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 P3H2Q8IVL5 708 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 RNASE6Q93091 150 aaKnown RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 NSMCE2Q96MF7 247 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 TMEM43Q9BTV4 400 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 RBM24Q9BX46 236 aaKnown RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 OPN3Q9H1Y3 402 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 BCO1Q9HAY6 547 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 DCAF13Q9NV06 445 aaKnown RBP18.98■□□□□ 0.63
ATG4D-212ENST00000590096 EMC3Q9P0I2 261 aa18.98■□□□□ 0.63
ATG4D-212ENST00000590096 AKR7A3O95154 331 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 H3F3AP84243 136 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 PIN1Q13526 163 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-212ENST00000590096 PDK3Q15120 406 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 LINC00114Q6XXX2 140 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 TSPYL5Q86VY4 417 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-212ENST00000590096 CCDC103Q8IW40 242 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 TMEM99Q8N816 258 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 PTDSS2Q9BVG9 487 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 AMBRA1Q9C0C7 1298 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 C12orf49Q9H741 205 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 NPDC1Q9NQX5 325 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-212ENST00000590096 C6orf203Q9P0P8 240 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-212ENST00000590096 RIMS3Q9UJD0 308 aa18.97■□□□□ 0.63
ATG4D-212ENST00000590096 AQP7P3A6NL99 342 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 ZNF724A8MTY0 619 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 A8MXE2 369 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 ZNF814B7Z6K7 855 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 GYG2O15488 501 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 CGAP01215 116 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 THY1P04216 161 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 PTNP21246 168 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 MFSD13AQ14CX5 517 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 DNAL1Q4LDG9 190 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 STK32CQ86UX6 486 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 TAAR8Q969N4 342 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 PRRC1Q96M27 445 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 ZNF300Q96RE9 604 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-212ENST00000590096 MUC13Q9H3R2 512 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 PLSCR4Q9NRQ2 329 aa18.96■□□□□ 0.63
ATG4D-212ENST00000590096 ING1Q9UK53 422 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-212ENST00000590096 IGKV3D-15A0A087WSY6 115 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 FTCDNL1E5RQL4 147 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 GPR171O14626 319 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 PDE5AO76074 875 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 LYPD3O95274 346 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 THRBP10828 461 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 COX6B1P14854 86 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 PEX19P40855 299 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 YAP1P46937 504 aaKnown RBP18.95■□□□□ 0.62
ATG4D-212ENST00000590096 SLC16A1P53985 500 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 ST3GAL3Q11203 375 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 HIST2H2BCQ6DN03 193 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 TMEM225Q6GV28 225 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 WDR88Q6ZMY6 472 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 MEX3BQ6ZN04 569 aaKnown RBP18.95■□□□□ 0.62
ATG4D-212ENST00000590096 NUFIP2Q7Z417 695 aaKnown RBP18.95■□□□□ 0.62
ATG4D-212ENST00000590096 GALNT5Q7Z7M9 940 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 CYP4Z1Q86W10 505 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 KIF18BQ86Y91 864 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 C10orf53Q8N6V4 93 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 OR6S1Q8NH40 331 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 ZNF775Q96BV0 537 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-212ENST00000590096 THTPAQ9BU02 230 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 FANCFQ9NPI8 374 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 GALNT8Q9NY28 637 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 V9GYQ6 96 aa18.95■□□□□ 0.62
ATG4D-212ENST00000590096 ZNF716A6NP11 495 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 RAMP1O60894 148 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 VAMP5O95183 116 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 FOXD4Q12950 439 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-212ENST00000590096 BNIP1Q12981 228 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 GPAT4Q86UL3 456 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 ZNF610Q8N9Z0 462 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 SPOCK3Q9BQ16 436 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 PRSS27Q9BQR3 290 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 FNDC11Q9BVV2 318 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 SF3B5Q9BWJ5 86 aaKnown RBP18.94■□□□□ 0.62
ATG4D-212ENST00000590096 SLC19A3Q9BZV2 496 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 ENKD1Q9H0I2 346 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 ACTR3BQ9P1U1 418 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 A4GNTQ9UNA3 340 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 RASD1Q9Y272 281 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 NOSIPQ9Y314 301 aaKnown RBP18.94■□□□□ 0.62
ATG4D-212ENST00000590096 CORINQ9Y5Q5 1042 aa18.94■□□□□ 0.62
ATG4D-212ENST00000590096 ITPR2Q14571 2701 aa18.93■□□□□ 0.62
ATG4D-212ENST00000590096 KPNA4O00629 521 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms