RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 WDR45Q9Y484 360 aa13.41□□□□□ -0.26
CCDC43-203ENST00000588210 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 EFSO43281 561 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 RNF13O43567 381 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 FOXS1O43638 330 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 F8A1P23610 371 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 ATP6V1E1P36543 226 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 RNF144AP50876 292 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF136P52737 540 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 SRSF6Q13247 344 aaKnown RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 FAM198BQ6UWH4 519 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 SAMD14Q8IZD0 417 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 UBE2J2Q8N2K1 259 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 OR2L13Q8N349 312 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 ZSCAN1Q8NBB4 408 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 OTULINQ96BN8 352 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 PRSS27Q9BQR3 290 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 KCNN2Q9H2S1 579 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 PHF11Q9UIL8 331 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF223Q9UK11 482 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 FARSAQ9Y285 508 aaKnown RBP13.4□□□□□ -0.26
CCDC43-203ENST00000588210 BOLA1Q9Y3E2 137 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 ALG5Q9Y673 324 aa13.4□□□□□ -0.26
CCDC43-203ENST00000588210 UNC119BA6NIH7 251 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 FAM25AB3EWG3 89 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 FAM25CB3EWG5 89 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 FAM25GB3EWG6 89 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 H0YIG0 161 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 NSA2O95478 260 aaKnown RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 ZGLP1P0C6A0 271 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF888P0CJ79 500 aaPredicted RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 PSKH1P11801 424 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 OR1D4P47884 311 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 CD83Q01151 205 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 DUSP8Q13202 625 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 COL9A2Q14055 689 aaPredicted RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 INSL4Q14641 139 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 MRPL14Q6P1L8 145 aaKnown RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 ABHD13Q7L211 337 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 RANBP3LQ86VV4 465 aaPredicted RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 OR51G2Q8NGK0 314 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 COL26A1Q96A83 441 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 SLC22A11Q9NSA0 550 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 IL17BQ9UHF5 180 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 MRPS2Q9Y399 296 aaKnown RBP13.4□□□□□ -0.27
CCDC43-203ENST00000588210 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.27
CCDC43-203ENST00000588210 MAP1BP46821 2468 aaKnown RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 A0A0A6YYC8 382 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 C2orf92A0A1B0GVN3 265 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 FAM240BA0A1B0GVZ2 78 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 I3L1I5 382 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 K7ENP7 123 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 SLC43A1O75387 559 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 RPS4Y1P22090 263 aaKnown RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 DUSP5Q16690 384 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 THOC7Q6I9Y2 204 aaKnown RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 INO80CQ6PI98 192 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 MEPCEQ7L2J0 689 aaKnown RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 OVCH1Q7RTY7 1134 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 METTL27Q8N6F8 245 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 FANK1Q8TC84 345 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 MMABQ96EY8 250 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-203ENST00000588210 ALG8Q9BVK2 526 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 SLC26A1Q9H2B4 701 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 OR52D1Q9H346 318 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 FER1L5A0AVI2 2057 aa13.39□□□□□ -0.27
CCDC43-203ENST00000588210 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 FAM183AA6NL82 134 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 C12orf71A8MTZ7 269 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 BHLHE40O14503 412 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 PAICSP22234 425 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ERP29P30040 261 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 FXYD6P3P58550 94 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 SKP1P63208 163 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ARHGAP40Q5TG30 622 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 HBMQ6B0K9 141 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 COX15Q7KZN9 410 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 GLCCI1Q86VQ1 547 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 RNF113BQ8IZP6 322 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 OR52L1Q8NGH7 329 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZFAND1Q8TCF1 268 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 UPRTQ96BW1 309 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 BEX2Q9BXY8 128 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ISG20L2Q9H9L3 353 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 INPP5EQ9NRR6 644 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 TCFL5Q9UL49 500 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms