RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 FADS1O60427 444 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CPNE3O75131 537 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 SLC25A12O75746 678 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CDRT1O95170 752 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 TXNDC12O95881 172 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 MT-ATP6P00846 226 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CD14P08571 375 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 OCM2P0CE71 109 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 OCMP0CE72 109 aaPredicted RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 TACR3P29371 465 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 EVI2BP34910 448 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 HTR3AP46098 478 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 POLR2HP52434 150 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 SLC25A1P53007 311 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 SLC16A1P53985 500 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 SUMO3P55854 103 aaPredicted RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 ACTA2P62736 377 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 ACTG2P63267 376 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 ZNF117Q03924 483 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 HSF2Q03933 536 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 PON3Q15166 354 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
LIG3-204ENST00000585740 ZNF791Q3KP31 576 aaPredicted RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 TRIM61Q5EBN2 209 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 PHF19Q5T6S3 580 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 PWWP2BQ6NUJ5 590 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CBLN3Q6UW01 205 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 DCDC5Q6ZRR9 648 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CPEB2Q7Z5Q1 589 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CENPSQ8N2Z9 138 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 TMEM99Q8N816 258 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 NFAM1Q8NET5 270 aaPredicted RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 OR10H4Q8NGA5 316 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 B4GALNT2Q8NHY0 566 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 SMPDL3BQ92485 455 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 SLC25A46Q96AG3 418 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 TMCO6Q96DC7 493 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 WDFY2Q96P53 400 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 CNN2Q99439 309 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 MROQ9BYG7 248 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 NRSN2Q9GZP1 204 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 KCNN2Q9H2S1 579 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 MMP25Q9NPA2 562 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 FSCN3Q9NQT6 498 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
LIG3-204ENST00000585740 UGT2A1Q9Y4X1 527 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 NPFFR2Q9Y5X5 522 aa10.27□□□□□ -0.77
LIG3-204ENST00000585740 ATRXP46100 2492 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TRAV36DV7A0A075B6V5 113 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 D6RAR5 112 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 NTN3O00634 580 aaPredicted RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 RNF13O43567 381 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 PFDN1O60925 122 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 UPK1BO75841 260 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 RGS9O75916 674 aaPredicted RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 ZFAND5O76080 213 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 SNX4O95219 450 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 OR2T7P0C7T2 308 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 ASAH2BP0C7U1 165 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 ZNF883P0CG24 379 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 HIST1H1CP16403 213 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 CFL1P23528 166 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 F8A1P23610 371 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 ITPKBP27987 946 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TMED10P49755 219 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 KRR1Q13601 381 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 TRIM16LQ309B1 348 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TBC1D25Q3MII6 688 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 ZNF528Q3MIS6 628 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 GPR139Q6DWJ6 353 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 FAAH2Q6GMR7 532 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 PAPD4Q6PIY7 484 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 TMEM205Q6UW68 189 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 NANOGNBQ7Z5D8 188 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 MARCH3Q86UD3 253 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 KLBQ86Z14 1044 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 EGFL6Q8IUX8 553 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 LRRC75AQ8NAA5 344 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 CYB561A3Q8NBI2 242 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 AGBL5Q8NDL9 886 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 SDR9C7Q8NEX9 313 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 OR2T27Q8NH04 317 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 OR6S1Q8NH40 331 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 OR4K13Q8NH42 304 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 STK35Q8TDR2 534 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TMEM234Q8WY98 164 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TTC9Q92623 222 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TRMT61AQ96FX7 289 aaKnown RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 HCAR1Q9BXC0 346 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 WDR54Q9H977 334 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 ADGRL4Q9HBW9 690 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 SNTG1Q9NSN8 517 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 TAS2R10Q9NYW0 307 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 GPN3Q9UHW5 284 aaPredicted RBP10.26□□□□□ -0.77
LIG3-204ENST00000585740 DAPK2Q9UIK4 370 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 MOKQ9UQ07 419 aa10.26□□□□□ -0.77
LIG3-204ENST00000585740 PCDHGB2Q9Y5G2 931 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms