RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CREB3L2Q70SY1 520 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 NUDCD3Q8IVD9 361 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 LRRC34Q8IZ02 419 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 ZNF781Q8N8C0 355 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 PPP1R36Q96LQ0 422 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 SLC38A2Q96QD8 506 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 SOX7Q9BT81 388 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 KATNB1Q9BVA0 655 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 PLK3Q9H4B4 646 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 MYOZ1Q9NP98 299 aaPredicted RBP12.59□□□□□ -0.39
SDF2-202ENST00000585428 CA10Q9NS85 328 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 RLIMQ9NVW2 624 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
SDF2-202ENST00000585428 FKBP7Q9Y680 259 aa12.59□□□□□ -0.39
SDF2-202ENST00000585428 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 PDE5AO76074 875 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 IL7RP16871 459 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 ZNF23P17027 643 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 SNRPD2P62316 118 aaKnown RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 TXNL4AP83876 142 aaKnown RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 SQLEQ14534 574 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 MAPK11Q15759 364 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 EFNB3Q15768 340 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 PDCD2Q16342 344 aaPredicted RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 ZSWIM7Q19AV6 140 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 DPY19L1Q2PZI1 675 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 TBRG1Q3YBR2 411 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 TMEM225Q6GV28 225 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 LINGO2Q7L985 606 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 ABHD12BQ7Z5M8 362 aaPredicted RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 FAM169BQ8N8A8 192 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 OR1K1Q8NGR3 316 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 MAGEE2Q8TD90 523 aaPredicted RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 VRK1Q99986 396 aaPredicted RBP12.58□□□□□ -0.4
SDF2-202ENST00000585428 CHODLQ9H9P2 273 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 PLCE1Q9P212 2302 aa12.58□□□□□ -0.4
SDF2-202ENST00000585428 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 CCDC154A6NI56 674 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 NR5A2O00482 541 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 LGI1O95970 557 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 IGLV1-44P01699 117 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 CRYAAP02489 173 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 DBIP07108 87 aaKnown RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 OR4A8P0C604 315 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 CXCR1P25024 350 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 GIFP27352 417 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 S100A3P33764 101 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 SELENOPP49908 381 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 CLNS1AP54105 237 aaKnown RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 ABCE1P61221 599 aaKnown RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 HPCAP84074 193 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 NAAAQ02083 359 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 OR7A5Q15622 319 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 IQCCQ4KMZ1 466 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 COX20Q5RI15 118 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 MRPL2Q5T653 305 aaKnown RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 KLHL24Q6TFL4 600 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 EPHX4Q8IUS5 362 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 ZNF317Q96PQ6 595 aaPredicted RBP12.57□□□□□ -0.4
SDF2-202ENST00000585428 SORT1Q99523 831 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 DOK1Q99704 481 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 BPESC1Q9GZL8 116 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 HAO1Q9UJM8 370 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
SDF2-202ENST00000585428 TMEM129A0AVI4 362 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 CDHR4A6H8M9 788 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 OR6C65A6NJZ3 312 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 A8MVM7 634 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 E9PBE3 544 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 BIRC5O15392 142 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 NPIPB7O75200 414 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 VAMP5O95183 116 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 STAMBPO95630 424 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 SERPINE1P05121 402 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 PGRP06401 933 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 GKN3PP0CG01 181 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 UQCRBP14927 111 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 LBPP18428 481 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 HNF1AP20823 631 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 IL12AP29459 219 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 CALCRP30988 508 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 CDKN2CP42773 168 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 PPOXP50336 477 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
SDF2-202ENST00000585428 HGFACQ04756 655 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 BNIP2Q12982 314 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 GNA13Q14344 377 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 LIPNQ5VXI9 398 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms