RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR10H2O60403 315 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ADRB1P08588 477 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM53BQ14153 422 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FGFBP1Q14512 234 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNHIT3Q15649 155 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM199XQ6PEV8 388 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PARM1Q6UWI2 310 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF550Q7Z398 422 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF527Q8NB42 609 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NMNAT3Q96T66 252 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 C20orf85Q9H1P6 137 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NOX4Q9NPH5 578 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DLL4Q9NR61 685 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ANKRD10Q9NXR5 420 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ATG2AQ2TAZ0 1938 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 A0A1B0GTQ1 180 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TNFRSF10CO14798 259 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PIN1P1O15428 100 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SELENOFO60613 162 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ICMTO60725 284 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PSMB10P40306 273 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RAB38P57729 211 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF141Q15928 474 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM69AQ5T7M9 428 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPS4Y2Q8TD47 263 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GFI1Q99684 422 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FBRSQ9HAH7 460 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PLEKHA1Q9HB21 404 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SCP2D1Q9UJQ7 156 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NPTNQ9Y639 398 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 AUP1Q9Y679 476 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IFITM5A6NNB3 132 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NPIPB9F8W1W9 429 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 AIPO00170 330 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ARPC3O15145 178 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SSNA1O43805 119 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HOXB2P14652 356 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SPI1P17947 270 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SDHBP21912 280 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GPR143P51810 404 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HSF2Q03933 536 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR8H3Q8N146 312 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PATE1Q8WXA2 126 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MRPL48Q96GC5 212 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HSPA12BQ96MM6 686 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NMNAT2Q9BZQ4 307 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPS6KB2Q9UBS0 482 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SCML1Q9UN30 329 aa13.01□□□□□ -0.33
CDK5RAP3-237ENST00000585163 A0A087WUJ7 227 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 A0A0J9YY10 115 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR6C68A6NDL8 312 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RDH16O75452 317 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HPXP02790 462 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DNASE1P24855 282 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 VSX2P58304 361 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZP1P60852 638 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ALG11Q2TAA5 492 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LINGO2Q7L985 606 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR11G2Q8NGC1 345 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DACT3Q96B18 629 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ORAI1Q96D31 301 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 VSTM2LQ96N03 204 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HRASLS2Q9NWW9 162 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 AKAP7Q9P0M2 348 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IMPA2O14732 288 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PDCD5O14737 125 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 KHNYNO15037 678 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GMDSO60547 372 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TMEM127O75204 238 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DPP4P27487 766 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CCR9P51686 369 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ISXQ2M1V0 245 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 C7orf57Q8NEG2 295 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZPLD1Q8TCW7 415 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC25A38Q96DW6 304 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RADILQ96JH8 1075 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LMAN2LQ9H0V9 348 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CERS4Q9HA82 394 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms