RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TACR3P29371 465 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PCGF2P35227 344 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 IDUAP35475 653 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RNPS1Q15287 305 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 MAPK11Q15759 364 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 VMACQ2NL98 169 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SYT14P1Q58G82 188 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RABL3Q5HYI8 236 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 AP1ARQ63HQ0 302 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PODNL1Q6PEZ8 512 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 BEND4Q6ZU67 534 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 FCRLAQ7L513 359 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SLC35B4Q969S0 331 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 LRRC37BQ96QE4 947 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 HOPXQ9BPY8 73 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 KLHDC3Q9BQ90 382 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TAPBPLQ9BX59 468 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMEM27Q9HBJ8 222 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 YAE1D1Q9NRH1 226 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PRDM4Q9UKN5 801 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMED7Q9Y3B3 224 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ELOA3DA6NLF2 546 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAAHO00519 579 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADAMDEC1O15204 470 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FRS3O43559 492 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 BCAS1O75363 584 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OPN1SWP03999 348 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CLK1P49759 484 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MAP2K6P52564 334 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR2B6P58173 313 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ETFDHQ16134 617 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF239Q16600 458 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ELOA3BQ3SY89 546 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C10orf111Q8N326 155 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC43A2Q8N370 569 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CLIP4Q8N3C7 705 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SMYD1Q8NB12 490 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ELOA3Q8NG57 546 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR2T12Q8NG77 320 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PROX1Q92786 737 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NAA11Q9BSU3 229 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 KLHL9Q9P2J3 617 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TESQ9UGI8 421 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HDGFL3Q9Y3E1 203 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ELOVL7A1L3X0 281 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAM220BPB1ANY3 271 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 M0QX08 132 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OVOL3O00110 214 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ETV2O00321 342 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PRKD3O94806 890 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NTN1O95631 604 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CD3EP07766 207 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SOD3P08294 240 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SHC1P29353 583 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PRDX6P30041 224 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DIO1P49895 249 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 RAC3P60763 192 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TMPPEQ6ZT21 453 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NET1Q7Z628 596 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PTOV1Q86YD1 416 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 STEAP2Q8NFT2 490 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 VANGL1Q8TAA9 524 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SMAP2Q8WU79 429 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TMEM158Q8WZ71 300 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FBXW5Q969U6 566 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 S100PBPQ96BU1 408 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DNAJA3Q96EY1 480 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADGRG7Q96K78 797 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CCT8L2Q96SF2 557 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR10A4Q9H209 315 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 EMC3Q9P0I2 261 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC9A8Q9Y2E8 581 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 RNF115Q9Y4L5 304 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HEATR5AQ86XA9 2040 aa11.63□□□□□ -0.55
CDK5RAP3-234ENST00000584525 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TMEM72A0PK05 275 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF208O43345 1280 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CD5LO43866 347 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 EIF1BO60739 113 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DNAJA2O60884 412 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 AHSA1O95433 338 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FESP07332 822 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 IL32P24001 234 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 IFNA8P32881 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms