RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ANKRD10Q9NXR5 420 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SELENONQ9NZV5 590 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 RHCGQ9UBD6 479 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 CBLCQ9ULV8 474 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 NPIPA1Q9UND3 350 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 HSPE1-MOB4S4R3N1 261 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 IGLV3-12A0A075B6K2 115 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 C2orf92A0A1B0GVN3 265 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 GXYLT2A0PJZ3 443 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 OR2W5A6NFC9 320 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 H3BNH8 94 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 OR5F1O95221 314 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 CLPTM1O96005 669 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 CYP4B1P13584 511 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ICAM2P13598 275 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 AGAP20933 346 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 GSTM3P21266 225 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 DRD5P21918 477 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 LCN1P31025 176 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 SLC37A1P57057 533 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 NUP107P57740 925 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ESRRGP62508 458 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 EEF1A1P68104 462 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 PSG6Q00889 435 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 IL5RAQ01344 420 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ALDH6A1Q02252 535 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 NPRL3Q12980 569 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 KCTD21Q4G0X4 260 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 EMC4Q5J8M3 183 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 RBM48Q5RL73 367 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 STEAP3Q658P3 488 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 USP51Q70EK9 711 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ZNF550Q7Z398 422 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 TSEN54Q7Z6J9 526 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 RBM45Q8IUH3 476 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 CMIPQ8IY22 773 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ZNF615Q8N8J6 731 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 AQP11Q8NBQ7 271 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 TSPAN14Q8NG11 270 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 OR6T1Q8NGN1 323 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 C14orf79Q96F83 325 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 LCORQ96JN0 433 aaPredicted RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 GAL3ST4Q96RP7 486 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 MCHR1Q99705 422 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ZNF559Q9BR84 538 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 JAM3Q9BX67 310 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 HES7Q9BYE0 225 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 UCK2Q9BZX2 261 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 TMEM27Q9HBJ8 222 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 MCCC2Q9HCC0 563 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 VCX3AQ9NNX9 186 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 TESQ9UGI8 421 aaKnown RBP9.29□□□□□ -0.92
SS18-221ENST00000582448 TEKT2Q9UIF3 430 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 ACAD8Q9UKU7 415 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 MEMO1Q9Y316 297 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 CLDN16Q9Y5I7 305 aa9.29□□□□□ -0.92
SS18-221ENST00000582448 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 A0A087WXM4 84 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 TRBV4-1A0A0J9YWV2 114 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 FRG2CA6NGY1 282 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 CPSF4LA6NMK7 179 aaKnown RBP9.28□□□□□ -0.92
SS18-221ENST00000582448 SCDO00767 359 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 FFAR1O14842 300 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 FMO6PO60774 539 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 MITFO75030 526 aaPredicted RBP9.28□□□□□ -0.92
SS18-221ENST00000582448 CYP7B1O75881 506 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 GNAO1P09471 354 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ABOP16442 354 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
SS18-221ENST00000582448 EEF1B2P24534 225 aaKnown RBP9.28□□□□□ -0.92
SS18-221ENST00000582448 IL12BP29460 328 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 RYKP34925 604 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ART1P52961 327 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ATP12AP54707 1039 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 NRG3P56975 720 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 COPZ1P61923 177 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 MYBPC1Q00872 1141 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 COX10Q12887 443 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 PCOLCEQ15113 449 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.28□□□□□ -0.92
SS18-221ENST00000582448 BTBD16Q32M84 506 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ENTPD8Q5MY95 495 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 MRPL2Q5T653 305 aaKnown RBP9.28□□□□□ -0.92
SS18-221ENST00000582448 AP1ARQ63HQ0 302 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ZNF730Q6ZMV8 503 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ZNF440Q8IYI8 595 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 PARP8Q8N3A8 854 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 OR5L2Q8NGL0 311 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 PIGXQ8TBF5 258 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 CA5BP1Q8WTZ4 195 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 SLC35B4Q969S0 331 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 ZG16BQ96DA0 208 aa9.28□□□□□ -0.92
SS18-221ENST00000582448 GPR137Q96N19 417 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms